RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 OR4S2Q8NH73 311 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 PRRG3Q9BZD7 231 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 COMMD5Q9GZQ3 224 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 SAV1Q9H4B6 383 aaPredicted RBP5.8□□□□□ -1.48
GARNL3-219ENST00000495172 TMEM231Q9H6L2 316 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 Q9HAA7 133 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
GARNL3-219ENST00000495172 IMPAD1Q9NX62 359 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 TAS2R8Q9NYW2 309 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 MRPS7Q9Y2R9 242 aaKnown RBP5.8□□□□□ -1.48
GARNL3-219ENST00000495172 NSG2Q9Y328 171 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 LY96Q9Y6Y9 160 aa5.8□□□□□ -1.48
GARNL3-219ENST00000495172 IGKV1D-8A0A087WSZ0 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 IGKV1D-13A0A0B4J2D9 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 GAGE12BA1L429 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 SAC3D1A6NKF1 404 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TNFSF12O43508 249 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 GAGE7O76087 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 GAGE12FP0CL80 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 GAGE12GP0CL81 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 GAGE12IP0CL82 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TRAPPC2P0DI81 140 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TRAPPC2BP0DI82 140 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 IGKV1-13P0DP09 117 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 RAP2AP10114 183 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 CRYBB3P26998 211 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 SNRPD3P62318 126 aaKnown RBP5.79□□□□□ -1.48
GARNL3-219ENST00000495172 ACSM3Q53FZ2 586 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 ADGRG5Q8IZF4 528 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 ACBD7Q8N6N7 88 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 OR4A4PQ8NGN8 299 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 LGALS12Q96DT0 336 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 ATP6V0BQ99437 205 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 CABLES2Q9BTV7 478 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TMEM59Q9BXS4 323 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 WDR12Q9GZL7 423 aaKnown RBP5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TMPRSS5Q9H3S3 457 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 C12orf4Q9NQ89 552 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 MRGBPQ9NV56 204 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 BET1LQ9NYM9 111 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 MRPL36Q9P0J6 103 aaKnown RBP5.79□□□□□ -1.48
GARNL3-219ENST00000495172 RBMX2Q9Y388 322 aaKnown RBP5.79□□□□□ -1.48
GARNL3-219ENST00000495172 PRELID3BQ9Y3B1 194 aa5.79□□□□□ -1.48
GARNL3-219ENST00000495172 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 CRXO43186 299 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-219ENST00000495172 TMEM50BP56557 158 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 EIF4EBP1Q13541 118 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-219ENST00000495172 ZNF79Q15937 498 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 SPINK13Q1W4C9 94 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 HSP90B2PQ58FF3 399 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 RBM48Q5RL73 367 aaKnown RBP5.78□□□□□ -1.48
GARNL3-219ENST00000495172 ZNF600Q6ZNG1 722 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 CMTM1Q8IZ96 169 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 H1FOOQ8IZA3 346 aaPredicted RBP5.78□□□□□ -1.48
GARNL3-219ENST00000495172 DEFB107AQ8IZN7 70 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 ARHGAP5-AS1Q96IT6 56 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 IGF2BP2-AS1Q96M15 143 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 METTL26Q96S19 204 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 CMSS1Q9BQ75 279 aaKnown RBP5.78□□□□□ -1.48
GARNL3-219ENST00000495172 LINC00467Q9BRT7 94 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 GINS4Q9BRT9 223 aa5.78□□□□□ -1.48
GARNL3-219ENST00000495172 MFNGO00587 321 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 CYB5BO43169 146 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 FAM107AO95990 144 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 FCER2P06734 321 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 CRYGDP07320 174 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 SERPINB10P48595 397 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 GBX2P52951 348 aaPredicted RBP5.77□□□□□ -1.49
GARNL3-219ENST00000495172 RPS11P62280 158 aaKnown RBP eCLIP5.77□□□□□ -1.49
GARNL3-219ENST00000495172 C16orf54Q6UWD8 224 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 AMTNQ6UX39 209 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 ZFP41Q8N8Y5 198 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 CANT1Q8WVQ1 401 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 PECRQ9BY49 303 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 TMEM140Q9NV12 185 aa5.77□□□□□ -1.49
GARNL3-219ENST00000495172 TRAV9-2A0A087WT02 112 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 TRBV5-5A0A0J9YX44 114 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 LALBAP00709 142 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 HRASP01112 189 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 NFYAP23511 347 aaPredicted RBP5.76□□□□□ -1.49
GARNL3-219ENST00000495172 MRPS15P82914 257 aaKnown RBP5.76□□□□□ -1.49
GARNL3-219ENST00000495172 PLAC9Q5JTB6 97 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 KDM4DQ6B0I6 523 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 LYPD5Q6UWN5 251 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 FOXI2Q6ZQN5 318 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 DHFR2Q86XF0 187 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 SYS1Q8N2H4 156 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 LINC01600Q96MT4 127 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 LPAR5Q9H1C0 372 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 DPH3P1Q9H4G8 78 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 AMBNQ9NP70 447 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 NRN1Q9NPD7 142 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 NDUFA4L2Q9NRX3 87 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 ERVK13-1Q9NX77 482 aa5.76□□□□□ -1.49
GARNL3-219ENST00000495172 FOXI3A8MTJ6 420 aaPredicted RBP5.75□□□□□ -1.49
GARNL3-219ENST00000495172 H3BS24 57 aa5.75□□□□□ -1.49
GARNL3-219ENST00000495172 TMEM50AO95807 157 aa5.75□□□□□ -1.49
GARNL3-219ENST00000495172 FCGR3AP08637 254 aa5.75□□□□□ -1.49
GARNL3-219ENST00000495172 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms