RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF414Q96IQ9 312 aa6.68□□□□□ -1.34
ITGB1-217ENST00000494395 SCGB3A2Q96PL1 93 aa6.68□□□□□ -1.34
ITGB1-217ENST00000494395 SLC25A21Q9BQT8 299 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-217ENST00000494395 HINT2Q9BX68 163 aa6.68□□□□□ -1.34
ITGB1-217ENST00000494395 S4R3C0 116 aa6.68□□□□□ -1.34
ITGB1-217ENST00000494395 SORL1Q92673 2214 aa6.68□□□□□ -1.34
ITGB1-217ENST00000494395 NAP1L6A6NFF2 107 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 PPP5D1E7EU14 171 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 PLA2G10O15496 165 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 SAP30O75446 220 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 IGLV1-51P01701 117 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 IGHV3-23P01764 117 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 AKR1C4P17516 323 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 CCR6P51684 374 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 RBMS2Q15434 407 aaKnown RBP6.67□□□□□ -1.34
ITGB1-217ENST00000494395 RPEL1Q2QD12 228 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 TMEM128Q5BJH2 165 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 TMEM268Q5VZI3 342 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 TRIQKQ629K1 86 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 ZNF57Q68EA5 555 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-217ENST00000494395 CLEC19AQ6UXS0 136 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 ADAMTSL5Q6ZMM2 481 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 SLC35G3Q8N808 338 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 OR9G4Q8NGQ1 327 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 OR1P1Q8NH06 330 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 EEF1AKMT3Q96AZ1 226 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 CXorf58Q96LI9 332 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 SIGLEC8Q9NYZ4 499 aa6.67□□□□□ -1.34
ITGB1-217ENST00000494395 A0A0B4J2A0 478 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 I3L2K1 104 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 LGALS9O00182 355 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
ITGB1-217ENST00000494395 NDUFB6O95139 128 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 HLA-AP01891 365 aaKnown RBP6.66□□□□□ -1.34
ITGB1-217ENST00000494395 CSN3P07498 182 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
ITGB1-217ENST00000494395 ARL3P36405 182 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 BSXQ3C1V8 233 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 ANKRD55Q3KP44 614 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 SPINK9Q5DT21 86 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 SLC25A24Q6NUK1 477 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 LYZL2Q7Z4W2 148 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 GPHB5Q86YW7 130 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 LRTM2Q8N967 370 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 OR1L6Q8NGR2 347 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 OR52E5Q8NH55 327 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 MRAPQ8TCY5 172 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 RRNAD1Q96FB5 475 aaKnown RBP6.66□□□□□ -1.34
ITGB1-217ENST00000494395 ATP6V0BQ99437 205 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
ITGB1-217ENST00000494395 PLEKHA3Q9HB20 300 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 PTTG2Q9NZH5 202 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 THYN1Q9P016 225 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 CACNG5Q9UF02 275 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 SHPKQ9UHJ6 478 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 KCNIP3Q9Y2W7 256 aa6.66□□□□□ -1.34
ITGB1-217ENST00000494395 DUXBA0A1W2PPF3 345 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 A8MWP6 167 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 CYB5BO43169 146 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 OR2C1O95371 312 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 SFT2D2O95562 160 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 IFNA17P01571 189 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 CLEC3BP05452 202 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 SPNP16150 400 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 EDN2P20800 178 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 FCGR2BP31994 310 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 SPCS3P61009 180 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 UBE2MP61081 183 aaKnown RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 CD69Q07108 199 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 PPP1R1AQ13522 171 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 TMED4Q7Z7H5 227 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 LGI3Q8N145 548 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 CENPSQ8N2Z9 138 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 NUDT10Q8NFP7 164 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 SCARB1Q8WTV0 552 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 PRR25Q96S07 402 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 ELOVL1Q9BW60 279 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 ZNF436Q9C0F3 470 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 ZMAT5Q9UDW3 170 aaKnown RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 FLVCR2Q9UPI3 526 aa6.65□□□□□ -1.34
ITGB1-217ENST00000494395 ZNF256Q9Y2P7 627 aaPredicted RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 LSM4Q9Y4Z0 139 aaKnown RBP6.65□□□□□ -1.34
ITGB1-217ENST00000494395 IGHV3-21A0A0B4J1V1 117 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 TMEM213A2RRL7 107 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 C2orf70A6NJV1 201 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 TGOLN2O43493 480 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 PITX3O75364 302 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 ANXA3P12429 323 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 GPR183P32249 361 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 INPP1P49441 399 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 SRPXP78539 464 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 ERHP84090 104 aaKnown RBP6.64□□□□□ -1.35
ITGB1-217ENST00000494395 C11orf87Q6NUJ2 197 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 UNQ9165/PRO28630Q6UXU0 137 aa6.64□□□□□ -1.35
ITGB1-217ENST00000494395 RNASE11Q8TAA1 199 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms