RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CCDC140Q96MF4 163 aa9.6□□□□□ -0.87
TRA2A-209ENST00000494255 IGHV3-21A0A0B4J1V1 117 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 CORTO00230 105 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 PITX3O75364 302 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 IL5P05113 134 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 RNASE2P10153 161 aaKnown RBP9.59□□□□□ -0.87
TRA2A-209ENST00000494255 OXLD1Q5BKU9 147 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 NOXA1Q86UR1 476 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 PINX1Q96BK5 328 aaKnown RBP9.59□□□□□ -0.87
TRA2A-209ENST00000494255 RBKSQ9H477 322 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 GPN1Q9HCN4 374 aaPredicted RBP9.59□□□□□ -0.87
TRA2A-209ENST00000494255 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
TRA2A-209ENST00000494255 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 G3V4G9 280 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 K7EIM0 57 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 BMPR1BO00238 502 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 PRAF2O60831 178 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 GGCTO75223 188 aaKnown RBP9.58□□□□□ -0.88
TRA2A-209ENST00000494255 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 C12orf45Q8N5I9 185 aaPredicted RBP9.58□□□□□ -0.88
TRA2A-209ENST00000494255 SLC24A4Q8NFF2 622 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 VWFP04275 2813 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 SEC14L6B5MCN3 397 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 PPP5D1E7EU14 171 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 MT-CO2P00403 227 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 IFNA10P01566 189 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 CLEC3BP05452 202 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 GPR183P32249 361 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 MFAP4P55083 255 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
TRA2A-209ENST00000494255 BSXQ3C1V8 233 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 Q56UQ5 140 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 C9orf66Q5T8R8 295 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 C1QL4Q86Z23 238 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 UBAC2Q8NBM4 344 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 SCARB1Q8WTV0 552 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
TRA2A-209ENST00000494255 GAR1Q9NY12 217 aaKnown RBP9.58□□□□□ -0.88
TRA2A-209ENST00000494255 I3L2K1 104 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 NPY1RP25929 384 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 OPRK1P41145 380 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 IAH1Q2TAA2 248 aaPredicted RBP9.57□□□□□ -0.88
TRA2A-209ENST00000494255 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 BSCL2Q96G97 398 aaPredicted RBP9.57□□□□□ -0.88
TRA2A-209ENST00000494255 CIB3Q96Q77 187 aaPredicted RBP9.57□□□□□ -0.88
TRA2A-209ENST00000494255 MARVELD1Q9BSK0 173 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 PALMDQ9NP74 551 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 U3KQ87 197 aa9.57□□□□□ -0.88
TRA2A-209ENST00000494255 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 RPS10-NUDT3A0A1W2PQS6 291 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 OR2T8A6NH00 312 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 WRBO00258 174 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 SYNGR2O43760 224 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 OR2C1O95371 312 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 LY86O95711 162 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 PTTG1O95997 202 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 IAPPP10997 89 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 NKX2-1P43699 371 aaPredicted RBP9.56□□□□□ -0.88
TRA2A-209ENST00000494255 ATP5IP56385 69 aaPredicted RBP9.56□□□□□ -0.88
TRA2A-209ENST00000494255 FAM106AQ4KMX7 169 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 ACSM6Q6P461 480 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 SPSB3Q6PJ21 355 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 RNASEH2CQ8TDP1 164 aaKnown RBP9.56□□□□□ -0.88
TRA2A-209ENST00000494255 OR4C12Q96R67 309 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 TXN2Q99757 166 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 MAGT1Q9H0U3 335 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 PKD1L1Q8TDX9 2849 aa9.56□□□□□ -0.88
TRA2A-209ENST00000494255 C5orf51A6NDU8 294 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 SNRPGP15A8MWD9 76 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 CCSO14618 274 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 TGOLN2O43493 480 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 SAP30O75446 220 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 NPBWR1P48145 328 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 INSL3P51460 131 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
TRA2A-209ENST00000494255 ZBTB8BQ8NAP8 495 aaPredicted RBP9.55□□□□□ -0.88
TRA2A-209ENST00000494255 OR10C1Q96KK4 312 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 ZC4H2Q9NQZ6 224 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 MGAM2Q2M2H8 2515 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
TRA2A-209ENST00000494255 GNG7O60262 68 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 SCGB1D2O95969 90 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 IGHV3-48P01763 117 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 IFNA4P05014 189 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 FCGR2BP31994 310 aaPredicted RBP9.55□□□□□ -0.88
TRA2A-209ENST00000494255 BEAN1Q3B7T3 259 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 ETFRF1Q6IPR1 90 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 C11orf87Q6NUJ2 197 aa9.55□□□□□ -0.88
TRA2A-209ENST00000494255 GSG1LQ6UXU4 331 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms