RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LOC107986453A0A1B0GWG9 222 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 OOEPA6NGQ2 149 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF878C9JN71 531 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 PPIAL4GP0DN37 164 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 AADACP22760 399 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 CDC34P49427 236 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-234ENST00000493923 PSMB3P49720 205 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 SNU13P55769 128 aaKnown RBP6.65□□□□□ -1.34
HDAC6-234ENST00000493923 UCP3P55916 312 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF121P58317 390 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-234ENST00000493923 UNC119Q13432 240 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM187Q14656 261 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 MMDQ15546 238 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 OR8B8Q15620 311 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 LDLRAD2Q5SZI1 272 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 ASPHD2Q6ICH7 369 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 FAM71F2Q6NXP2 309 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 BATF2Q8N1L9 274 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 FAM216BQ8N7L0 139 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 ZNF709Q8N972 641 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 OR5D14Q8NGL3 314 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 SCGB1C1Q8TD33 95 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 LRRC29Q8WV35 223 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 RNF133Q8WVZ7 376 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 DYRK2Q92630 601 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 IL22RA2Q969J5 263 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 PPP1R14AQ96A00 147 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 CCL13Q99616 98 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 TMEM59Q9BXS4 323 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 SAMD10Q9BYL1 202 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 BANF2Q9H503 90 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 SMPXQ9UHP9 88 aa6.65□□□□□ -1.34
HDAC6-234ENST00000493923 DNAH3Q8TD57 4116 aa6.65□□□□□ -1.35
HDAC6-234ENST00000493923 NOTCH3Q9UM47 2321 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 A0A0U1RQK1 487 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 CEBPZOSA8MTT3 80 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 C17orf112F2Z3M2 114 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 CORTO00230 105 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 ENSAO43768 121 aaKnown RBP6.64□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF253O75346 499 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 HYPMO75409 117 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF20P17024 532 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 CEACAM3P40198 252 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 NKX2-1P43699 371 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-234ENST00000493923 RPL23P62829 140 aaKnown RBP6.64□□□□□ -1.35
HDAC6-234ENST00000493923 MEF2BQ02080 365 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-234ENST00000493923 KLRD1Q13241 179 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 PRR31Q5SQ13 230 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 SAMD13Q5VXD3 122 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 TEX36Q5VZQ5 186 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 CST9LP1Q5W188 147 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 HIST2H2BDQ6DRA6 164 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 WDR82Q6UXN9 313 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 Q6YL49 198 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 Q6ZWC4 215 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 KIR3DL3Q8N743 410 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 TMEM217Q8N7C4 229 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 Q8N7P7 452 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 Q8NFD4 153 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 OR52L2PQ8NGH6 319 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 SGMS2Q8NHU3 365 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 LHX4Q969G2 390 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 SPSB1Q96BD6 273 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 HSPB9Q9BQS6 159 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 OR10A2Q9H208 303 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 C1RLQ9NZP8 487 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 PSG11Q9UQ72 335 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 SLC22A13Q9Y226 551 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 MRPS28Q9Y2Q9 187 aaKnown RBP6.64□□□□□ -1.35
HDAC6-234ENST00000493923 LRP12Q9Y561 859 aa6.64□□□□□ -1.35
HDAC6-234ENST00000493923 A0A1W2PRD5 423 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 A0A1W2PRF3 423 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 A0A1W2PRM7 423 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 IGLC7A0M8Q6 106 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 ZFP92A6NM28 416 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 SRRM5B3KS81 715 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 XRCC2O43543 280 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 OR7C2O60412 319 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 MT-ND6P03923 174 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF728P0DKX0 622 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 CRISP2P16562 243 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 FAHP16930 419 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 GZMHP20718 246 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 IL3RAP26951 378 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TSPOP30536 169 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 ZNF93P35789 620 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-234ENST00000493923 SLC22A6Q4U2R8 563 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TMEM144Q7Z5S9 345 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 FAM89BQ8N5H3 189 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TMEM252Q8N6L7 170 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 OR8B12Q8NGG6 310 aa6.63□□□□□ -1.35
HDAC6-234ENST00000493923 TXNDC17Q9BRA2 123 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms