RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 LHFPL5Q8TAF8 219 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 RBPMSQ93062 196 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 FYTTD1Q96QD9 318 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 ATP6V0BQ99437 205 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 QTRT1Q9BXR0 403 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 CACFD1Q9UGQ2 172 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 SHPKQ9UHJ6 478 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 DMRT1Q9Y5R6 373 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 STARD9Q9P2P6 4700 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 IGLV11-55A0A075B6I3 123 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 A0A0G2JRQ6 117 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 CENPXA8MT69 81 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 LYRM1O43325 122 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 PITX3O75364 302 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 RBMXL2O75526 392 aaKnown RBP5.18□□□□□ -1.58
VPS52-219ENST00000493379 UPK1BO75841 260 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 SNAPC5O75971 98 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 SFT2D2O95562 160 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 TRAPPC2P0DI81 140 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 TRAPPC2BP0DI82 140 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 HIST1H1BP16401 226 aaKnown RBP5.18□□□□□ -1.58
VPS52-219ENST00000493379 SRPXP78539 464 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 PRCDQ00LT1 54 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 WT1-ASQ06250 92 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 ZNF846Q147U1 533 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 BSXQ3C1V8 233 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 SP6Q3SY56 376 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 NMSQ5H8A3 153 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 C10orf55Q5SWW7 151 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 TRIQKQ629K1 86 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 ZNF57Q68EA5 555 aaPredicted RBP5.18□□□□□ -1.58
VPS52-219ENST00000493379 TMEM65Q6PI78 240 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 C18orf65Q6ZTR6 163 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 SSX9Q7RTT3 188 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 H2BFWTQ7Z2G1 175 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 ZNF114Q8NC26 417 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 NECAP1Q8NC96 275 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 DUSP18Q8NEJ0 188 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 OR5T1Q8NG75 326 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 GRPEL2Q8TAA5 225 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 GPR146Q96CH1 333 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 COMMD5Q9GZQ3 224 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 SEPSECSQ9HD40 501 aaKnown RBP5.18□□□□□ -1.58
VPS52-219ENST00000493379 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 TBC1D24Q9ULP9 559 aa5.18□□□□□ -1.58
VPS52-219ENST00000493379 TRGV11A0A075B6L2 103 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 FAM223BA6NKX1 122 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 J3KRW8 73 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 CCL24O00175 119 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 DUS4LO95620 317 aaKnown RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 TCRBP04435 133 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 HSPB1P04792 205 aaKnown RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 LGALS1P09382 135 aaKnown RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 MYOD1P15172 320 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 AREGP15514 252 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 CCR6P51684 374 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 TIRAPP58753 221 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 ECSCRQ19T08 205 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 NSUN5P1Q3KNT7 163 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 FAM223AQ8IWN6 122 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 LGI3Q8N145 548 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 CENPSQ8N2Z9 138 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 OR1L6Q8NGR2 347 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 OR1P1Q8NH06 330 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 GNB4Q9HAV0 340 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 OR51B2Q9Y5P1 312 aa5.17□□□□□ -1.58
VPS52-219ENST00000493379 TET2Q6N021 2002 aaPredicted RBP5.17□□□□□ -1.58
VPS52-219ENST00000493379 MUC4Q99102 2169 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 A0A1B0GU03 582 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 C9orf170A2RU37 121 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 DHFRP00374 187 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 HLA-AP01891 365 aaKnown RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 TRGV3P03979 118 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 ANXA3P12429 323 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 AKR1C4P17516 323 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 FCGR2BP31994 310 aaPredicted RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 MFAP2P55001 183 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 ATP5IP56385 69 aaPredicted RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 SPCS3P61009 180 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 GNB1P62873 340 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 KLF5Q13887 457 aaPredicted RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 TRIM16LQ309B1 348 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 ANKRD55Q3KP44 614 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 LYZL2Q7Z4W2 148 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 SLC35G3Q8N808 338 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 KLHL30-AS1Q8NEE0 82 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 OR11H1Q8NG94 326 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 OR10W1Q8NGF6 305 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 OR1N2Q8NGR9 330 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 OR4A16Q8NH70 328 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 VN1R17PQ8TDU5 208 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 MITD1Q8WV92 249 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 RRNAD1Q96FB5 475 aaKnown RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 RANGRFQ9HD47 186 aaPredicted RBP5.16□□□□□ -1.58
VPS52-219ENST00000493379 SIGLEC8Q9NYZ4 499 aa5.16□□□□□ -1.58
VPS52-219ENST00000493379 DKK2Q9UBU2 259 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms