RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CTSDP07339 412 aaPredicted RBP8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 CTRB1P17538 263 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 GNRHRP30968 328 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 ADMP35318 185 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 MAS1LP35410 378 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 UBE2MP61081 183 aaKnown RBP8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 TSPAN5P62079 268 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 CTRB2Q6GPI1 263 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 CADM3Q8N126 398 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 OR10J5Q8NHC4 309 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 VSTM2AQ8TAG5 236 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 MARCH1Q8TCQ1 289 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 TMEM230Q96A57 120 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 ZNF486Q96H40 463 aaPredicted RBP8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 SCGB3A2Q96PL1 93 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 CSTL1Q9H114 145 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 ZNF430Q9H8G1 570 aaPredicted RBP8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 UBQLN2Q9UHD9 624 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 APLNQ9ULZ1 77 aa8.22□□□□□ -1.09
CLCNKA-206ENST00000491433 TRAV6A0A075B6T7 132 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 MPTX1A8MV57 137 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 SNRPGP15A8MWD9 76 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 IGLL5B9A064 214 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 CDK2AP2O75956 126 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 SAA1P0DJI8 122 aaPredicted RBP8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 RPL35AP18077 110 aaKnown RBP8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 NFYAP23511 347 aaPredicted RBP8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 BCAP31P51572 246 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 MFAP2P55001 183 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 RND3P61587 244 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 EIF4EBP1Q13541 118 aaPredicted RBP8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 SCGB2B2Q4G0G5 96 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 LPCAT3Q6P1A2 487 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 CCDC140Q96MF4 163 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 FYTTD1Q96QD9 318 aaKnown RBP8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 SELENOKQ9Y6D0 94 aa8.21□□□□□ -1.1
CLCNKA-206ENST00000491433 IGKV1D-13A0A0B4J2D9 117 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 BET1O15155 118 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 IGKV1-13P0DP09 117 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 DEFA4P12838 97 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 HLA-GP17693 338 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 DUTP33316 252 aaKnown RBP8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 RPL27AP46776 148 aaKnown RBP8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 SUPT4H1P63272 117 aaKnown RBP8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 KLK9Q2XQG4 91 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 TMEM128Q5BJH2 165 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 ZFAND1Q8TCF1 268 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 SLC2A9Q9NRM0 540 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 THYN1Q9P016 225 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 KLK9Q9UKQ9 250 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 PRELID3BQ9Y3B1 194 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 ALG5Q9Y673 324 aa8.2□□□□□ -1.1
CLCNKA-206ENST00000491433 A0A0B4J2A0 478 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 HMX3A6NHT5 357 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 CYB5BO43169 146 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 IGHV3-23P01764 117 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 CLEC3BP05452 202 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 CRYGCP07315 174 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 OR4E1P0C645 316 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 TRAPPC2P0DI81 140 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 TRAPPC2BP0DI82 140 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 FCGR2BP31994 310 aaPredicted RBP8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 TAS2R31P59538 309 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 KCTD9Q7L273 389 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 ZBTB34Q8NCN2 500 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 OR11H2Q8NH07 326 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 OR4A5Q8NH83 315 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 CD300LFQ8TDQ1 290 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 ZNF436Q9C0F3 470 aaPredicted RBP8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 HRH4Q9H3N8 390 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 DAZ1Q9NQZ3 744 aaKnown RBP8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
CLCNKA-206ENST00000491433 C9orf170A2RU37 121 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 CRYM-AS1A6NIL9 109 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 DBX1A6NMT0 343 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 TEX22C9J3V5 150 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 SLC22A5O76082 557 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 LRTM2Q8N967 370 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 ZNF431Q8TF32 576 aaPredicted RBP8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 MITD1Q8WV92 249 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 OR2A7Q96R45 310 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 SCRT2Q9NQ03 307 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 CCL28Q9NRJ3 127 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
CLCNKA-206ENST00000491433 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 LINC00473A8K010 186 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 GPR31O00270 319 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 KBTBD11O94819 623 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 SFT2D2O95562 160 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 RLN1P04808 185 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 SULT1A3P0DMM9 295 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 SULT1A4P0DMN0 295 aa8.17□□□□□ -1.1
CLCNKA-206ENST00000491433 HERV-K104P61576 105 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms