RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RGS5O15539 181 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 ZNF207O43670 478 aaKnown RBP6.17□□□□□ -1.42
LSM2-213ENST00000491421 ATG12O94817 140 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 CTSGP08311 255 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 AKR1C2P52895 323 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 MFAP4P55083 255 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 PIGPP57054 158 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 HSPE1P61604 102 aaKnown RBP6.17□□□□□ -1.42
LSM2-213ENST00000491421 RELQ04864 619 aaPredicted RBP6.17□□□□□ -1.42
LSM2-213ENST00000491421 IZUMO4Q1ZYL8 232 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 SPINK9Q5DT21 86 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 LAMTOR1Q6IAA8 161 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 GPR141Q7Z602 305 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 LHFPL1Q86WI0 220 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 ZNF114Q8NC26 417 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 TP53RKQ96S44 253 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 ABHD1Q96SE0 405 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 MRPS26Q9BYN8 205 aaKnown RBP6.17□□□□□ -1.42
LSM2-213ENST00000491421 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 C3orf85A0A1B0GTC6 90 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 OR4C46A6NHA9 309 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 C15orf62A8K5M9 175 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 I3L2K1 104 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 K7EMT4 169 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 YIF1AO95070 293 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 RAB3DO95716 219 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 MT-CO2P00403 227 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 IGKV1-5P01602 117 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 IGHV3-48P01763 117 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 CD74P04233 296 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 SNCAP37840 140 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 TAS2R19P59542 299 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 ERHP84090 104 aaKnown RBP6.16□□□□□ -1.42
LSM2-213ENST00000491421 TRIM16LQ309B1 348 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 SCGB2B2Q4G0G5 96 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 IQCF2Q8IXL9 164 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 SLC35G3Q8N808 338 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 CCDC71LQ8N9Z2 235 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 TMEM229BQ8NBD8 167 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 OR4D10Q8NGI6 311 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 OR13C8Q8NGS7 320 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 TERB2Q8NHR7 220 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 ZFAND1Q8TCF1 268 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 PINX1Q96BK5 328 aaKnown RBP6.16□□□□□ -1.42
LSM2-213ENST00000491421 TXN2Q99757 166 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 PDCD10Q9BUL8 212 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 COPZ2Q9P299 210 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 UBQLN2Q9UHD9 624 aa6.16□□□□□ -1.42
LSM2-213ENST00000491421 A0A0B4J293 547 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 IGHV7-4-1A0A0J9YVY3 117 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 GABARAPH6UMI1 98 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 GNG7O60262 68 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 IFNA17P01571 189 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 CTSDP07339 412 aaPredicted RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 P0C879 139 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 FCGR2BP31994 310 aaPredicted RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 ALDH3B2P48448 385 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 HOXA1P49639 335 aaPredicted RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 APOC4P55056 127 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 MEF2DQ14814 521 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 SPCS2Q15005 226 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 SP6Q3SY56 376 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 STEAP1BQ6NZ63 245 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 TMEM116Q8NCL8 245 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 RNASE11Q8TAA1 199 aaKnown RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 MARCH1Q8TCQ1 289 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 RRNAD1Q96FB5 475 aaKnown RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 RNF2Q99496 336 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 OVOL2Q9BRP0 275 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 NXF2Q9GZY0 626 aaKnown RBP6.15□□□□□ -1.42
LSM2-213ENST00000491421 MIXL1Q9H2W2 232 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 SMPXQ9UHP9 88 aa6.15□□□□□ -1.42
LSM2-213ENST00000491421 IGHV3-49A0A0A0MS15 119 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 TRAV14DV4A0A0A6YYC5 116 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 DISC1C4P0D8 188 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 CTDSP2O14595 271 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 CHEK1O14757 476 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 ST8SIA3O43173 380 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 UCP1P25874 307 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 ETV6P41212 452 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 NPBWR1P48145 328 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 SSBP1Q04837 148 aaKnown RBP6.14□□□□□ -1.43
LSM2-213ENST00000491421 FAAP20Q6NZ36 180 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 CLVS1Q8IUQ0 354 aaPredicted RBP6.14□□□□□ -1.43
LSM2-213ENST00000491421 DUSP18Q8NEJ0 188 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 SMIM4Q8WVI0 70 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 ZNF414Q96IQ9 312 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 OR10C1Q96KK4 312 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 GINS3Q9BRX5 216 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 TMEM222Q9H0R3 208 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 ENY2Q9NPA8 101 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 C14orf166Q9Y224 244 aaKnown RBP6.14□□□□□ -1.43
LSM2-213ENST00000491421 LYSTQ99698 3801 aa6.14□□□□□ -1.43
LSM2-213ENST00000491421 IGHV3OR16-13A0A075B7E8 117 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 IGHV3-74A0A0B4J1X5 117 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
LSM2-213ENST00000491421 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms