RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CLVS1Q8IUQ0 354 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-219ENST00000491183 TXN2Q99757 166 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 NXF2Q9GZY0 626 aaKnown RBP13.4□□□□□ -0.26
HMGN1-219ENST00000491183 COPZ2Q9P299 210 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 UBQLN2Q9UHD9 624 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 SMPXQ9UHP9 88 aa13.4□□□□□ -0.26
HMGN1-219ENST00000491183 INS-IGF2F8WCM5 200 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 NUPL2O15504 423 aaKnown RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 CTSDP07339 412 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 UCP1P25874 307 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 AKR1C2P52895 323 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 MRPS10P82664 201 aaKnown RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 SSBP1Q04837 148 aaKnown RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 PVRIGQ6DKI7 326 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 CCDC71LQ8N9Z2 235 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 DYNC2LI1Q8TCX1 351 aa13.39□□□□□ -0.27
HMGN1-219ENST00000491183 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 RTBDNQ9BSG5 229 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-219ENST00000491183 LCE6AA0A183 80 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 ETV6P41212 452 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 RELQ04864 619 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-219ENST00000491183 TRIM16LQ309B1 348 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 Q6ZRM9 215 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 SMIM4Q8WVI0 70 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 OR10C1Q96KK4 312 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 OVOL2Q9BRP0 275 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 RYR2Q92736 4967 aa13.38□□□□□ -0.27
HMGN1-219ENST00000491183 IGHV3-49A0A0A0MS15 119 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 IGHV7-4-1A0A0J9YVY3 117 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 CHEK1O14757 476 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 CTDSPLO15194 276 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 ATG12O94817 140 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 IFNA17P01571 189 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 ODF3L2Q3SX64 289 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 SLC35G3Q8N808 338 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 GLYATL2Q8WU03 294 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 RAB2BQ8WUD1 216 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 RNF2Q99496 336 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
HMGN1-219ENST00000491183 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 GNG7O60262 68 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 YIF1AO95070 293 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 CDS2O95674 445 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 OR5AC1P0C628 307 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 RNASE2P10153 161 aaKnown RBP13.36□□□□□ -0.27
HMGN1-219ENST00000491183 SNCAP37840 140 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 TMBIM6P55061 237 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 IL18Q14116 193 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 MEF2DQ14814 521 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 LHFPL5Q8TAF8 219 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 RRNAD1Q96FB5 475 aaKnown RBP13.36□□□□□ -0.27
HMGN1-219ENST00000491183 TMEM222Q9H0R3 208 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 CCDC59Q9P031 241 aaKnown RBP13.36□□□□□ -0.27
HMGN1-219ENST00000491183 GPR132Q9UNW8 380 aa13.36□□□□□ -0.27
HMGN1-219ENST00000491183 TEX13DA0A0J9YY54 714 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-219ENST00000491183 B3GALNT1O75752 331 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 MLANAQ16655 118 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 TOMM20LQ6UXN7 152 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 DUSP18Q8NEJ0 188 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
HMGN1-219ENST00000491183 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
HMGN1-219ENST00000491183 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 DISC1C4P0D8 188 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 TMEM50AO95807 157 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 SURF2Q15527 256 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-219ENST00000491183 SELENOHQ8IZQ5 122 aaKnown RBP13.34□□□□□ -0.27
HMGN1-219ENST00000491183 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 PDCD10Q9BUL8 212 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
HMGN1-219ENST00000491183 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-219ENST00000491183 NAA60Q9H7X0 242 aa13.34□□□□□ -0.27
HMGN1-219ENST00000491183 MRPL36Q9P0J6 103 aaKnown RBP13.34□□□□□ -0.27
HMGN1-219ENST00000491183 IGHV3OR16-13A0A075B7E8 117 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 IGHV3-74A0A0B4J1X5 117 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 NPBWR1P48145 328 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 HOXA1P49639 335 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-219ENST00000491183 BSXQ3C1V8 233 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 AARDQ4LEZ3 155 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 LILRB2Q8N423 598 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
HMGN1-219ENST00000491183 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
HMGN1-219ENST00000491183 A0A1B0GU03 582 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 ANKRD20A5PA0PJZ0 165 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 GSTZ1O43708 216 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 RPL5P46777 297 aaKnown RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 SUB1P53999 127 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 APRG1Q8IVJ8 170 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 OR51S1Q8NGJ8 323 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 RBPMSQ93062 196 aaKnown RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 GPR146Q96CH1 333 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms