RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 NSG2Q9Y328 171 aa8.89□□□□□ -0.99
SEMA6C-208ENST00000489944 S4R3C0 116 aa8.89□□□□□ -0.99
SEMA6C-208ENST00000489944 DISC1C4P0D8 188 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 F8W735 103 aaPredicted RBP8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 RAB3DO95716 219 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 IGKV1-39P01597 117 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 IGKV1D-39P04432 117 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 P0C879 139 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 ADMP35318 185 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 RPL5P46777 297 aaKnown RBP8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 MFAP2P55001 183 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 PAFAH1B2P68402 229 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 DHODHQ02127 395 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 STEAP1BQ6NZ63 245 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 DUSP18Q8NEJ0 188 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 OR52E5Q8NH55 327 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 SMIM4Q8WVI0 70 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 SCGB3A2Q96PL1 93 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 PRRT1Q99946 306 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 TMEM231Q9H6L2 316 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 CCDC59Q9P031 241 aaKnown RBP8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 RSL24D1Q9UHA3 163 aaKnown RBP8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 SMPXQ9UHP9 88 aa8.88□□□□□ -0.99
SEMA6C-208ENST00000489944 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 M0QYG6 137 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 RGS5O15539 181 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 GNG7O60262 68 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 SCAF4O95104 1147 aaKnown RBP8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 NOXA1Q86UR1 476 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 SLC35G3Q8N808 338 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 UBAC2Q8NBM4 344 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 DEDD2Q8WXF8 326 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 GALNT14Q96FL9 552 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 CHRDL1Q9BU40 450 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 ENY2Q9NPA8 101 aa8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 C14orf166Q9Y224 244 aaKnown RBP8.87□□□□□ -0.99
SEMA6C-208ENST00000489944 TRAV14DV4A0A0A6YYC5 116 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 IGHV7-4-1A0A0J9YVY3 117 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 DBX1A6NMT0 343 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 NOL3O60936 208 aaKnown RBP8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 DFFBO76075 338 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 JTBO76095 146 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 CDS2O95674 445 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 MT-CO2P00403 227 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 IFNA17P01571 189 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 AKAIN1P0CW23 69 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 SPCS3P61009 180 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 TRIM16LQ309B1 348 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 ZNF600Q6ZNG1 722 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 TMEM217Q8N7C4 229 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 TMEM116Q8NCL8 245 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 IL22RA2Q969J5 263 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 C20orf24Q9BUV8 137 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 TMEM222Q9H0R3 208 aa8.86□□□□□ -0.99
SEMA6C-208ENST00000489944 A0A0B4J293 547 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 IGHV3-35A0A0C4DH35 117 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 RPS10-NUDT3A0A1W2PQS6 291 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 A0A1W2PS18 150 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 CHEK1O14757 476 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 GSTZ1O43708 216 aaPredicted RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 IGKV1-5P01602 117 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 EDN2P20800 178 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 HTR2BP41595 481 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 ATP5IP56385 69 aaPredicted RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 STPG3Q8N7X2 389 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 OR13C8Q8NGS7 320 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 RBPMSQ93062 196 aaKnown RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 RHPN1-AS1Q9BWJ2 59 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 NAA50Q9GZZ1 169 aaKnown RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 KCNIP3Q9Y2W7 256 aa8.85□□□□□ -0.99
SEMA6C-208ENST00000489944 TEX13DA0A0J9YY54 714 aaPredicted RBP8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 ST8SIA3O43173 380 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 YIF1AO95070 293 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 SRPXP78539 464 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 TNFRSF9Q07011 255 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 BSXQ3C1V8 233 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 OR4X1Q8NH49 305 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 DIRAS2Q96HU8 199 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 NARS2Q96I59 477 aaKnown RBP8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 MIXL1Q9H2W2 232 aa8.84□□□□□ -0.99
SEMA6C-208ENST00000489944 ANKRD20A5PA0PJZ0 165 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 CRYM-AS1A6NIL9 109 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 TMEM50AO95807 157 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 RNASE2P10153 161 aaKnown RBP8.83□□□□□ -1
SEMA6C-208ENST00000489944 SLC25A4P12235 298 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 FAUP35544 74 aaKnown RBP8.83□□□□□ -1
SEMA6C-208ENST00000489944 HOXA1P49639 335 aaPredicted RBP8.83□□□□□ -1
SEMA6C-208ENST00000489944 EIF2B2P49770 351 aaKnown RBP8.83□□□□□ -1
SEMA6C-208ENST00000489944 PPP5CP53041 499 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 IL18Q14116 193 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 ODF3L2Q3SX64 289 aa8.83□□□□□ -1
SEMA6C-208ENST00000489944 TMEM41BQ5BJD5 291 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms