RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 OR5G3P0C626 314 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 SELENOTP62341 195 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 FOXL1Q12952 345 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 ETFRF1Q6IPR1 90 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 OR4P4Q8NGL7 312 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 ZNRD1Q9P1U0 126 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 PITPNC1Q9UKF7 332 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-208ENST00000489611 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 GNLYP22749 145 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 GRNP28799 593 aaKnown RBP12.11□□□□□ -0.47
COL9A1-208ENST00000489611 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-208ENST00000489611 SLC16A13Q7RTY0 426 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 C8orf46Q8TAG6 207 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 PFDN5Q99471 154 aa12.11□□□□□ -0.47
COL9A1-208ENST00000489611 NBASA2RRP1 2371 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 TRAV9-1A0A075B6T8 112 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 PHOX2AO14813 284 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 MYOD1P15172 320 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 COMPP49747 757 aaPredicted RBP12.1□□□□□ -0.47
COL9A1-208ENST00000489611 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 C11orf42Q8N5U0 333 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 RNF5Q99942 180 aa12.1□□□□□ -0.47
COL9A1-208ENST00000489611 MDFIC2A0A1B0GVS7 189 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 PCP4L1A6NKN8 68 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 OR10J1P30954 320 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 OR1L4Q8NGR5 311 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 FRZBQ92765 325 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 ACY3Q96HD9 319 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 SFRP2Q96HF1 295 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 CLEC7AQ9BXN2 247 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-208ENST00000489611 MIOXQ9UGB7 285 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 CACNA1BQ00975 2339 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 CORTO00230 105 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 IGLV1-47P01700 117 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 REG1BP48304 166 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 ZNF114Q8NC26 417 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
COL9A1-208ENST00000489611 YTHDF2Q9Y5A9 579 aaKnown RBP12.09□□□□□ -0.47
COL9A1-208ENST00000489611 IGKV1OR2-108A0A075B7D4 117 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 IGHV2-26A0A0B4J1V2 119 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 A0A1W2PRE2 83 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 C8orf88P0DMB2 117 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 DNLZQ5SXM8 178 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 LINC01560Q8TB33 94 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 RAB1BQ9H0U4 201 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 ADGRG4Q8IZF6 3080 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 KALRNO60229 2985 aa12.08□□□□□ -0.48
COL9A1-208ENST00000489611 A0A1W2PPQ1 181 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 ACTL6BO94805 426 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 BPIFB3P59826 476 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 PAX2Q02962 417 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 PSG5Q15238 335 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 COA6Q5JTJ3 125 aaKnown RBP12.07□□□□□ -0.48
COL9A1-208ENST00000489611 PVRIGQ6DKI7 326 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 ZNF841Q6ZN19 808 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 C22orf15Q8WYQ4 148 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 SLC25A33Q9BSK2 321 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 TNCP24821 2201 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 SCO2A0A1W2PP80 73 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 PRB1P04280 392 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 SPATA31B1PQ5VZV4 182 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 OR8B3Q8NGG8 313 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 OR4X1Q8NH49 305 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
COL9A1-208ENST00000489611 OR8B2Q96RD0 313 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
COL9A1-208ENST00000489611 TCRBV4S1A1TA0A5B7 111 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 BUB1B-PAK6H3BSN5 160 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 SLC25A17O43808 307 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 RPL19P84098 196 aaKnown RBP12.06□□□□□ -0.48
COL9A1-208ENST00000489611 SRSF8Q9BRL6 282 aaKnown RBP12.06□□□□□ -0.48
COL9A1-208ENST00000489611 DERL1Q9BUN8 251 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 INSIG2Q9Y5U4 225 aa12.06□□□□□ -0.48
COL9A1-208ENST00000489611 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 OR7C2O60412 319 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 PPIAL4GP0DN37 164 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 PRSS8Q16651 343 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 ACTL10Q5JWF8 245 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 OR10G8Q8NGN5 311 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 TRBV20OR9-2A0A075B6H5 130 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 CGB1A6NKQ9 187 aa12.05□□□□□ -0.48
COL9A1-208ENST00000489611 ENSAO43768 121 aaKnown RBP12.05□□□□□ -0.48
COL9A1-208ENST00000489611 FOXH1O75593 365 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms