RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 DFFBO76075 338 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 PMP2P02689 132 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
TOP3B-217ENST00000489581 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 HLA-DMBP28068 263 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 SCAND1P57086 179 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 RPL11P62913 178 aaKnown RBP12.33□□□□□ -0.44
TOP3B-217ENST00000489581 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
TOP3B-217ENST00000489581 TOMM20LQ6UXN7 152 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 STHQ8IWL8 128 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 PINX1Q96BK5 328 aaKnown RBP12.33□□□□□ -0.44
TOP3B-217ENST00000489581 MOB3AQ96BX8 217 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 HRH4Q9H3N8 390 aa12.33□□□□□ -0.44
TOP3B-217ENST00000489581 IGHV4-28A0A0C4DH34 117 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 CD5P06127 495 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-217ENST00000489581 GABARAPL2P60520 117 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 LINC00336Q6ZUF6 198 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 CMTM1Q8IZ96 169 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 TSC22D3Q99576 134 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 GINS3Q9BRX5 216 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 RYR1P21817 5038 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
TOP3B-217ENST00000489581 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 PKHD1P08F94 4074 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 IGHV4-4A0A075B6R2 117 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 GPR31O00270 319 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 HSPA13P48723 471 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 Q6ZTC4 211 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 DUSP18Q8NEJ0 188 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 FXYD6Q9H0Q3 95 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 VCX3BQ9H321 246 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 RABAC1Q9UI14 185 aa12.31□□□□□ -0.44
TOP3B-217ENST00000489581 TRAV10A0A0B4J240 114 aa12.3□□□□□ -0.44
TOP3B-217ENST00000489581 LOC100506127A0A0U1RQW1 187 aa12.3□□□□□ -0.44
TOP3B-217ENST00000489581 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
TOP3B-217ENST00000489581 OR5H2Q8NGV7 314 aa12.3□□□□□ -0.44
TOP3B-217ENST00000489581 OR4A16Q8NH70 328 aa12.3□□□□□ -0.44
TOP3B-217ENST00000489581 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
TOP3B-217ENST00000489581 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-217ENST00000489581 TRAV2A0A0B4J234 112 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 A0A1B0GVY2 172 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 MIFP14174 115 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 PRCDQ00LT1 54 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 SEC22AQ96IW7 307 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
TOP3B-217ENST00000489581 KNCNA6PVL3 124 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 NPBWR1P48145 328 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 ERHP84090 104 aaKnown RBP12.28□□□□□ -0.44
TOP3B-217ENST00000489581 SPINK9Q5DT21 86 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 ZNF600Q6ZNG1 722 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
TOP3B-217ENST00000489581 CENPSQ8N2Z9 138 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 CLEC5AQ9NY25 188 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 X6R8D5 127 aa12.28□□□□□ -0.44
TOP3B-217ENST00000489581 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.44
TOP3B-217ENST00000489581 A0A1B0GU03 582 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 IGKV1-39P01597 117 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 IGKV1D-39P04432 117 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 MED14OSP0DP75 135 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 C4BPBP20851 252 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 TAS2R46P59540 309 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.45
TOP3B-217ENST00000489581 PVRIGQ6DKI7 326 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 STXBP6Q8NFX7 210 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 S100A16Q96FQ6 103 aaKnown RBP12.27□□□□□ -0.45
TOP3B-217ENST00000489581 RNF126Q9BV68 326 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 RAB26Q9ULW5 256 aa12.27□□□□□ -0.45
TOP3B-217ENST00000489581 ZNF705EA8MWA4 302 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-217ENST00000489581 K7EQG2 157 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM50AO95807 157 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 ZNF688P0C7X2 276 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 NAT1P18440 290 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 NPPCP23582 126 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 IZUMO4Q1ZYL8 232 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM41BQ5BJD5 291 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 MORN3Q6PF18 240 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-217ENST00000489581 ZNF767PQ75MW2 155 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 TBC1D26Q86UD7 250 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 LYSMD2Q8IV50 215 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 MRGPRFQ96AM1 343 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 FAM212BQ9NTI7 297 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-217ENST00000489581 CELA1Q9UNI1 258 aa12.26□□□□□ -0.45
TOP3B-217ENST00000489581 PRSS29PA6NIE9 313 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 M0R2N4 97 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 SPP1P10451 314 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 HLA-DMAP28067 261 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 S100GP29377 79 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 HRH1P35367 487 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 TAS2R20P59543 309 aa12.25□□□□□ -0.45
TOP3B-217ENST00000489581 DEFB131BA0A096LNP1 70 aa12.24□□□□□ -0.45
TOP3B-217ENST00000489581 A0A1W2PS18 150 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms