RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
SRRM1-216ENST00000489130 BCL7BQ9BQE9 202 aa9.37□□□□□ -0.91
SRRM1-216ENST00000489130 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
SRRM1-216ENST00000489130 GGTLC1Q9BX51 225 aa9.37□□□□□ -0.91
SRRM1-216ENST00000489130 CCDC59Q9P031 241 aaKnown RBP9.37□□□□□ -0.91
SRRM1-216ENST00000489130 COPZ2Q9P299 210 aa9.37□□□□□ -0.91
SRRM1-216ENST00000489130 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 LOC102724200A0A096LPH7 203 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-216ENST00000489130 CTDSPLO15194 276 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 ATG12O94817 140 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 CTSDP07339 412 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-216ENST00000489130 UCP1P25874 307 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 MFAP4P55083 255 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 MEF2DQ14814 521 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 TRIM16LQ309B1 348 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 PVRIGQ6DKI7 326 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 LAMTOR1Q6IAA8 161 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 CLVS1Q8IUQ0 354 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-216ENST00000489130 MARCH1Q8TCQ1 289 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 DYNC2LI1Q8TCX1 351 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 OR10C1Q96KK4 312 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
SRRM1-216ENST00000489130 LYSTQ99698 3801 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 ST8SIA3O43173 380 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 TMBIM6P55061 237 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 SURF2Q15527 256 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-216ENST00000489130 SP6Q3SY56 376 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 SPINK9Q5DT21 86 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 FAAP20Q6NZ36 180 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 SLC35G3Q8N808 338 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 NXF2Q9GZY0 626 aaKnown RBP9.35□□□□□ -0.91
SRRM1-216ENST00000489130 RABL2AQ9UBK7 228 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-216ENST00000489130 SMPXQ9UHP9 88 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 RABL2BQ9UNT1 228 aa9.35□□□□□ -0.91
SRRM1-216ENST00000489130 A0A0G2JRQ6 117 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 IGHV7-4-1A0A0J9YVY3 117 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 ZNF207O43670 478 aaKnown RBP9.34□□□□□ -0.91
SRRM1-216ENST00000489130 CDS2O95674 445 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 IFNA17P01571 189 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 ODF3L2Q3SX64 289 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 AARDQ4LEZ3 155 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 OR4C16Q8NGL9 310 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 PINX1Q96BK5 328 aaKnown RBP9.34□□□□□ -0.91
SRRM1-216ENST00000489130 RRNAD1Q96FB5 475 aaKnown RBP9.34□□□□□ -0.91
SRRM1-216ENST00000489130 DIRAS2Q96HU8 199 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 RTBDNQ9BSG5 229 aaPredicted RBP9.34□□□□□ -0.91
SRRM1-216ENST00000489130 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 TMEM222Q9H0R3 208 aa9.34□□□□□ -0.91
SRRM1-216ENST00000489130 LCE6AA0A183 80 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 DISC1C4P0D8 188 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 CHEK1O14757 476 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 GNG7O60262 68 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 YIF1AO95070 293 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 OR5AC1P0C628 307 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 AKAIN1P0CW23 69 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 RNASE2P10153 161 aaKnown RBP9.33□□□□□ -0.92
SRRM1-216ENST00000489130 SNCAP37840 140 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 ETV6P41212 452 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 NPBWR1P48145 328 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 IL18Q14116 193 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 FAM219AQ8IW50 185 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 TMEM116Q8NCL8 245 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 IL17DQ8TAD2 202 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 RNF2Q99496 336 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 RHPN1-AS1Q9BWJ2 59 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 SLIRPQ9GZT3 109 aaKnown RBP9.33□□□□□ -0.92
SRRM1-216ENST00000489130 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 UBQLN2Q9UHD9 624 aa9.33□□□□□ -0.92
SRRM1-216ENST00000489130 C14orf166Q9Y224 244 aaKnown RBP9.33□□□□□ -0.92
SRRM1-216ENST00000489130 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 TEX13DA0A0J9YY54 714 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 CORTO00230 105 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 GSTZ1O43708 216 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 RPL5P46777 297 aaKnown RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 HOXA1P49639 335 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 APOC4P55056 127 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 BSXQ3C1V8 233 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 Q6ZRM9 215 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 DUSP18Q8NEJ0 188 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 OR52E5Q8NH55 327 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 LHFPL5Q8TAF8 219 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 RBPMSQ93062 196 aaKnown RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 PRRT1Q99946 306 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 C6orf62Q9GZU0 229 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-216ENST00000489130 GPR132Q9UNW8 380 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 DNAH1Q9P2D7 4330 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 TENM2Q9NT68 2774 aa9.32□□□□□ -0.92
SRRM1-216ENST00000489130 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
SRRM1-216ENST00000489130 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
SRRM1-216ENST00000489130 ANKRD20A5PA0PJZ0 165 aa9.31□□□□□ -0.92
SRRM1-216ENST00000489130 CRYM-AS1A6NIL9 109 aa9.31□□□□□ -0.92
SRRM1-216ENST00000489130 H3BMQ9 156 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms