RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 MFAP2P55001 183 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 ID3Q02535 119 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 PVRIGQ6DKI7 326 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 LINC00482Q8N8I6 264 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 OR4D5Q8NGN0 318 aa12.33□□□□□ -0.44
HDAC7-224ENST00000488927 GAR1Q9NY12 217 aaKnown RBP12.33□□□□□ -0.44
HDAC7-224ENST00000488927 ANKRD34BA5PLL1 514 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 C5orf51A6NDU8 294 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 MPTX1A8MV57 137 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 FAM25EA8MYX2 175 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 WRBO00258 174 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 SYNGR2O43760 224 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 SPNP16150 400 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 CD33P20138 364 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-224ENST00000488927 RPP30P78346 268 aaKnown RBP12.32□□□□□ -0.44
HDAC7-224ENST00000488927 GSG1LQ6UXU4 331 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 ZBTB8BQ8NAP8 495 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-224ENST00000488927 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 MISP3Q96FF7 219 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 OR10C1Q96KK4 312 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 DUX3Q96PT4 197 aa12.32□□□□□ -0.44
HDAC7-224ENST00000488927 IGHV4OR15-8A0A075B7B6 117 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 A0A087WW49 117 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 K7EIM0 57 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 IFNA10P01566 189 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 NPY1RP25929 384 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 TATDN3Q17R31 274 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 ZNF502Q8TBZ5 544 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 RNASEH2CQ8TDP1 164 aaKnown RBP12.31□□□□□ -0.44
HDAC7-224ENST00000488927 C2orf50Q96LR7 162 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 TXN2Q99757 166 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 MCRIP2Q9BUT9 160 aaKnown RBP12.31□□□□□ -0.44
HDAC7-224ENST00000488927 C21orf62Q9NYP8 219 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
HDAC7-224ENST00000488927 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 C7orf66A4D0T2 115 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 MFSD2BA6NFX1 497 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 I3L2K1 104 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 CCSO14618 274 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 SSNA1O43805 119 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 MT-CO2P00403 227 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 FCGR2BP31994 310 aaPredicted RBP12.3□□□□□ -0.44
HDAC7-224ENST00000488927 RPEL1Q2QD12 228 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 SCARB1Q8WTV0 552 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
HDAC7-224ENST00000488927 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
HDAC7-224ENST00000488927 CCDC140Q96MF4 163 aa12.3□□□□□ -0.44
HDAC7-224ENST00000488927 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
HDAC7-224ENST00000488927 CLEC3BP05452 202 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-224ENST00000488927 ARL3P36405 182 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 OPRK1P41145 380 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 MFAP4P55083 255 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 RAB11AP62491 216 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 OXA1LQ15070 435 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 ETFRF1Q6IPR1 90 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 CLEC19AQ6UXS0 136 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 BSCL2Q96G97 398 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-224ENST00000488927 RAB40CQ96S21 281 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 GPR61Q9BZJ8 451 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 MAGT1Q9H0U3 335 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 VWFP04275 2813 aa12.29□□□□□ -0.44
HDAC7-224ENST00000488927 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 SCGB1D2O95969 90 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 TRBV12-3P01733 135 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 IAPPP10997 89 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 NPBWR1P48145 328 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC7-224ENST00000488927 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
HDAC7-224ENST00000488927 S4R3C0 116 aa12.28□□□□□ -0.44
HDAC7-224ENST00000488927 WNK1Q9H4A3 2382 aa12.27□□□□□ -0.44
HDAC7-224ENST00000488927 IGHV3-21A0A0B4J1V1 117 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 BMPR1BO00238 502 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 GOSR2O14653 212 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 OVOL1O14753 267 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 SSSCA1O60232 199 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 IFNA4P05014 189 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 SLC25A4P12235 298 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 GPR183P32249 361 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 SLURP1P55000 103 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 TAS2R30P59541 319 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 Q56UQ5 140 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 SMIM8Q96KF7 97 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 ALG5Q9Y673 324 aa12.27□□□□□ -0.45
HDAC7-224ENST00000488927 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 TGOLN2O43493 480 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 MBPP02686 304 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-224ENST00000488927 KLF5Q13887 457 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-224ENST00000488927 ACSM6Q6P461 480 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 GPHB5Q86YW7 130 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 C1QL4Q86Z23 238 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 UBAC2Q8NBM4 344 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 TMEM170AQ8WVE7 144 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 DCUN1D4Q92564 292 aa12.26□□□□□ -0.45
HDAC7-224ENST00000488927 DLX4Q92988 240 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms