RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GINS4Q9BRT9 223 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 PRTFDC1Q9NRG1 225 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 MED9Q9NWA0 146 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 MICAL3Q7RTP6 2002 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 ECM29Q5VYK3 1845 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 TRAV14DV4A0A0A6YYC5 116 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 DPRXA6NFQ7 191 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 RNASE3P12724 160 aaKnown RBP0.85□□□□□ -2.27
CD46-215ENST00000488596 SPI1P17947 270 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 STX5Q13190 355 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 IMPG1Q17R60 797 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 SPOPLQ6IQ16 392 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 ZNF565Q8N9K5 539 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 OR8J2Q8NGG1 315 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 PPP1R14BQ96C90 147 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 C8orf76Q96K31 380 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 CCDC42Q96M95 316 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 SERPINI1Q99574 410 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 COMMD5Q9GZQ3 224 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 UCK1Q9HA47 277 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 CKLFQ9UBR5 152 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 ANAPC1Q9H1A4 1944 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 PLB1Q6P1J6 1458 aa0.85□□□□□ -2.27
CD46-215ENST00000488596 SDK1Q7Z5N4 2213 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 DLG5Q8TDM6 1919 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 EXOC1LA0A1B0GW35 172 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 RPS17P08708 135 aaKnown RBP0.84□□□□□ -2.27
CD46-215ENST00000488596 CEBPGP53567 150 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 PSME3P61289 254 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 RGS21Q2M5E4 152 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 ACOT6Q3I5F7 207 aaPredicted RBP0.84□□□□□ -2.27
CD46-215ENST00000488596 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 LPCAT3Q6P1A2 487 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 MIR17HGQ75NE6 70 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 C20orf196Q8IYI0 205 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 OR13C4Q8NGS5 318 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 TERB2Q8NHR7 220 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 AQP3Q92482 292 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 H1FXQ92522 213 aaKnown RBP0.84□□□□□ -2.27
CD46-215ENST00000488596 TSPAN32Q96QS1 320 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 OR52E6Q96RD3 313 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 SLC50A1Q9BRV3 221 aa0.84□□□□□ -2.27
CD46-215ENST00000488596 BRWD1Q9NSI6 2320 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 HELZ2Q9BYK8 2649 aaKnown RBP0.83□□□□□ -2.28
CD46-215ENST00000488596 TRAV1-1A0A0B4J248 108 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 FAM236DA0A1B0GTK5 79 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 OR4C46A6NHA9 309 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 CLDN24A6NM45 220 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 BUB1B-PAK6H3BSN5 160 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 FADS1O60427 444 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 OR5F1O95221 314 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 CRYZL1O95825 349 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 CTSDP07339 412 aaPredicted RBP0.83□□□□□ -2.28
CD46-215ENST00000488596 HTR1AP08908 422 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 FAM236CP0DP71 79 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 IL9P15248 144 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 MRPS15P82914 257 aaKnown RBP0.83□□□□□ -2.28
CD46-215ENST00000488596 PLCXD2Q0VAA5 305 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 KHDC3LQ587J8 217 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.83□□□□□ -2.28
CD46-215ENST00000488596 Q6ZQT0 140 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 ZNF826PQ6ZT77 177 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 CLDN22Q8N7P3 220 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 TOMM6Q96B49 74 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 NIPSNAP1Q9BPW8 284 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 TMEM147Q9BVK8 224 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 OR5AC2Q9NZP5 309 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 MRPL27Q9P0M9 148 aaKnown RBP0.83□□□□□ -2.28
CD46-215ENST00000488596 VPS29Q9UBQ0 182 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 RTTNQ86VV8 2226 aa0.83□□□□□ -2.28
CD46-215ENST00000488596 FLG2Q5D862 2391 aaPredicted RBP0.82□□□□□ -2.28
CD46-215ENST00000488596 TRAV9-1A0A075B6T8 112 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 TRAV26-2A0A0B4J265 109 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 FUOMA2VDF0 154 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 TMEM114B3SHH9 223 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 GOLGA6L19H0YKK7 550 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 SERPINA6P08185 405 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 ASAH2BP0C7U1 165 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 CDKN2CP42773 168 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 CDC42P60953 191 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 CTAG1AP78358 180 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 FADDQ13158 208 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 CDK10Q15131 360 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 TRAPPC5Q8IUR0 188 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 LINC00471Q8N535 108 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 SIGLECL1Q8N7X8 197 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 OR52R1Q8NGF1 315 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 OR5A1Q8NGJ0 315 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 ITFG2Q969R8 447 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 CHMP6Q96FZ7 201 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 DCUN1D1Q96GG9 259 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 ULBP3Q9BZM4 244 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 SLC39A9Q9NUM3 307 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 ERGIC3Q9Y282 383 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 TMEM56-RWDD3S4R434 201 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
CD46-215ENST00000488596 NUP155O75694 1391 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms