RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 ARL16Q0P5N6 197 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 CLLU1Q5K131 121 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 C10orf55Q5SWW7 151 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 SRSF12Q8WXF0 261 aaKnown RBP9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 SLC25A32Q9H2D1 315 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 PITPNC1Q9UKF7 332 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 MOB4Q9Y3A3 225 aa9.56□□□□□ -0.88
HLA-DOB-209ENST00000488325 FNDC10F2Z333 226 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 OR13C7P0DN81 318 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 RNASE2P10153 161 aaKnown RBP9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 FXYD3Q14802 87 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 HSD17B11Q8NBQ5 300 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 ZNF114Q8NC26 417 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 OR10W1Q8NGF6 305 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 ABHD5Q8WTS1 349 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 TMED6Q8WW62 240 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 SSX3Q99909 188 aa9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 TET2Q6N021 2002 aaPredicted RBP9.55□□□□□ -0.88
HLA-DOB-209ENST00000488325 UBE2L5PA0A1B0GUS4 154 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 IGLC7A0M8Q6 106 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 CGB1A6NKQ9 187 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 FCN1O00602 326 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 FGF16O43320 207 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 FBXO24O75426 580 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 FSHBP01225 129 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 SPP1P10451 314 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 ATP6V0CP27449 155 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 VWC2Q2TAL6 325 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 ZNF562Q6V9R5 426 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 Q8N9W7 124 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 OR1L6Q8NGR2 347 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 RNASEH2CQ8TDP1 164 aaKnown RBP9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 RNF141Q8WVD5 230 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 RBM14Q96PK6 669 aaKnown RBP9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 WDR61Q9GZS3 305 aaKnown RBP9.54□□□□□ -0.88
HLA-DOB-209ENST00000488325 SMCO3A2RU48 225 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 BTBD17A6NE02 478 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 TEX22C9J3V5 150 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 E7EUB6 86 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 M0QZK8 103 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 CORTO00230 105 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 CYB5BO43169 146 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 SOX15O60248 233 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 MPDU1O75352 247 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 SULT1A2P50226 295 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 RAB5CP51148 216 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 WT1-ASQ06250 92 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 C9orf139Q6ZV77 190 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 ZNF709Q8N972 641 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 TMEM170AQ8WVE7 144 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 SSMEM1Q8WWF3 244 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 CACNG8Q8WXS5 425 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 TAF15Q92804 592 aaKnown RBP eCLIP9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 DUX5Q96PT3 197 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 TIMM9Q9Y5J7 89 aa9.53□□□□□ -0.88
HLA-DOB-209ENST00000488325 A0A1B0GW64 132 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 RPS10-NUDT3A0A1W2PQS6 291 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 UMAD1C9J7I0 102 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 C17orf112F2Z3M2 114 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 FGF7P21781 194 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 GPX4P36969 197 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 CX3CL1P78423 397 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 BLOC1S1P78537 153 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 SSBP2P81877 361 aaPredicted RBP9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 FAM74A1Q5RGS3 127 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 ETFRF1Q6IPR1 90 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 OR1P1Q8NH06 330 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 OR5R1Q8NH85 324 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 C22orf15Q8WYQ4 148 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 P2RX4Q99571 388 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 F11RQ9Y624 299 aaKnown RBP9.52□□□□□ -0.89
HLA-DOB-209ENST00000488325 A6NDX4 124 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 H3BUX3 64 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 M0QZ24 198 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 NMBP08949 121 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 AREGP15514 252 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 SERF2P84101 59 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 AKR1C1Q04828 323 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 CD69Q07108 199 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 RAB31Q13636 194 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 PVRIGQ6DKI7 326 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 C5orf56Q8N8D9 126 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 PIFOQ8TCI5 191 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 SAT2Q96F10 170 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms