RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 NIPSNAP1Q9BPW8 284 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 YIPF3Q9GZM5 350 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 MRPL27Q9P0M9 148 aaKnown RBP0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 KIF13BQ9NQT8 1826 aa0.68□□□□□ -2.3
R3HDM1-219ENST00000488035 BUB1B-PAK6H3BSN5 160 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 IFNA16P05015 189 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 SPI1P17947 270 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 ITGB3BPQ13352 177 aaPredicted RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 RPL22L1Q6P5R6 122 aaKnown RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 AAED1Q7RTV5 226 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 RPS19BP1Q86WX3 136 aaKnown RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 LRRC25Q8N386 305 aaPredicted RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 ANKRD29Q8N6D5 301 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 ZNF565Q8N9K5 539 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 H1FXQ92522 213 aaKnown RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 IMP4Q96G21 291 aaKnown RBP0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 ARL5BQ96KC2 179 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 ANAPC1Q9H1A4 1944 aa0.67□□□□□ -2.3
R3HDM1-219ENST00000488035 COL4A5P29400 1685 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 FAM236DA0A1B0GTK5 79 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 EXOC1LA0A1B0GW35 172 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 OR4C46A6NHA9 309 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 PSMD12O00232 456 aaPredicted RBP0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 HTR1AP08908 422 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 FAM236CP0DP71 79 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 CD79AP11912 226 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 SULT1A1P50225 295 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 MYL6P60660 151 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 UBE2IP63279 158 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 PLCXD2Q0VAA5 305 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 CCDC122Q5T0U0 273 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 PTRHD1Q6GMV3 140 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 C20orf196Q8IYI0 205 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 OR8J2Q8NGG1 315 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 OR13C4Q8NGS5 318 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 DNAJC9Q8WXX5 260 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 AQP3Q92482 292 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 C8orf76Q96K31 380 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 SCGB3A1Q96QR1 104 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 TSPAN32Q96QS1 320 aa0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 ZNF106Q9H2Y7 1883 aaKnown RBP0.66□□□□□ -2.3
R3HDM1-219ENST00000488035 EML6Q6ZMW3 1958 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 A0A087WUJ7 227 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAV14DV4A0A0A6YYC5 116 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAV26-2A0A0B4J265 109 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 DPRXA6NFQ7 191 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 CLDN24A6NM45 220 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 M0R036 132 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 FADS1O60427 444 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 RPS17P08708 135 aaKnown RBP0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 ASAH2BP0C7U1 165 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 PSME3P61289 254 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 STX5Q13190 355 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 SPANXN3Q5MJ09 141 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 LPCAT3Q6P1A2 487 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 ZNF826PQ6ZT77 177 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 CLDN22Q8N7P3 220 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 OR5A1Q8NGJ0 315 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 MCFD2Q8NI22 146 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 TOMM6Q96B49 74 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 OR52E6Q96RD3 313 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 SERPINI1Q99574 410 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 SLC50A1Q9BRV3 221 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 PRTFDC1Q9NRG1 225 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 VPS29Q9UBQ0 182 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 CKLFQ9UBR5 152 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 C22orf24Q9Y442 160 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 V9GYY5 206 aaPredicted RBP0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 ROBO3Q96MS0 1386 aa0.65□□□□□ -2.31
R3HDM1-219ENST00000488035 ZFYVE9O95405 1425 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAV1-1A0A0B4J248 108 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 OR5F1O95221 314 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 CNIH1O95406 144 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 CDC42P60953 191 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 LSM6P62312 80 aaKnown RBP0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 RANP62826 216 aaKnown RBP0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 MIR17HGQ75NE6 70 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 CCDC42Q96M95 316 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 GINS4Q9BRT9 223 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 TMEM147Q9BVK8 224 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 ULBP3Q9BZM4 244 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 PARVGQ9HBI0 331 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 TMEM56-RWDD3S4R434 201 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 PLXND1Q9Y4D7 1925 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 TNRC6BQ9UPQ9 1833 aaKnown RBP0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 TOPBP1Q92547 1522 aa0.64□□□□□ -2.31
R3HDM1-219ENST00000488035 NUP155O75694 1391 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 TRAV9-1A0A075B6T8 112 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 C2orf70A6NJV1 201 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 KPNA3O00505 521 aaPredicted RBP0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 OR2T1O43869 369 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 OR2J2O76002 312 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 TTRP02766 147 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 SERPINA6P08185 405 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 AESQ08117 197 aa0.63□□□□□ -2.31
R3HDM1-219ENST00000488035 KHDC3LQ587J8 217 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms