RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 THYN1Q9P016 225 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 MRPL27Q9P0M9 148 aaKnown RBP3.05□□□□□ -1.92
BRCA1-217ENST00000487825 LGALS13Q9UHV8 139 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 MGAT4AQ9UM21 535 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 ENPP4Q9Y6X5 453 aa3.05□□□□□ -1.92
BRCA1-217ENST00000487825 TEX48A0A1B0GUV7 120 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 OR5H14A6NHG9 310 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 ORC5O43913 435 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 RBBP9O75884 186 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 ATP5HO75947 161 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 ALOX5APP20292 161 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-217ENST00000487825 VBP1P61758 197 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 TSPAN31Q12999 210 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 PSG5Q15238 335 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 AGKQ53H12 422 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 LINC00242Q5T6M2 205 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 METTL21CQ5VZV1 264 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 RPL13AP3Q6NVV1 102 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 FAM71F2Q6NXP2 309 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 UNQ9165/PRO28630Q6UXU0 137 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 SIGLEC15Q6ZMC9 328 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 OR8D4Q8NGM9 314 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 OR13C9Q8NGT0 318 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 CNIH3Q8TBE1 160 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 MRGPRFQ96AM1 343 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 RNF5Q99942 180 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 MROQ9BYG7 248 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 Q9H3A6 140 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 SLC2A9Q9NRM0 540 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 PIPOXQ9P0Z9 390 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 DHRS4-AS1Q9P1J3 65 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 GNG12Q9UBI6 72 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF221Q9UK13 617 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 SPATA2Q9UM82 520 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 SAMD4AQ9UPU9 718 aaKnown RBP3.04□□□□□ -1.92
BRCA1-217ENST00000487825 RNF24Q9Y225 148 aa3.04□□□□□ -1.92
BRCA1-217ENST00000487825 IGKV1-9A0A0C4DH69 117 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 TMEM30CPA0ZSE6 113 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 METTL21EPA6NDL7 271 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 H0YJW9 148 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 FXYD1O00168 92 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 CHEK1O14757 476 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 MRPS14O60783 128 aaKnown RBP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF253O75346 499 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 FADS2O95864 444 aaKnown RBP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 OR9G9P0C7N8 305 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 SAA2P0DJI9 122 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 CMC4P56277 68 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 ZNF79Q15937 498 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 C6orf226Q5I0X4 101 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 BCL2L15Q5TBC7 163 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 LAMTOR1Q6IAA8 161 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 EPGNQ6UW88 154 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 GPR141Q7Z602 305 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 STX12Q86Y82 276 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 SAXO1Q8IYX7 474 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 NECAP1Q8NC96 275 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 OR8J3Q8NGG0 315 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 EXOSC1Q9Y3B2 195 aaKnown RBP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 WASHC3Q9Y3C0 194 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 LINC00588Q9Y4M8 146 aa3.03□□□□□ -1.92
BRCA1-217ENST00000487825 PUS1Q9Y606 427 aaKnown RBP eCLIP3.03□□□□□ -1.92
BRCA1-217ENST00000487825 RNF222A6NCQ9 220 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 RIIAD1A6NNX1 92 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 GMNNO75496 209 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 SCGNO76038 276 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 IFNGP01579 166 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 PRH1P02810 166 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 SPART-AS1P0CW21 52 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 APELAP0DMC3 54 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 CT45A6P0DMU7 189 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 CT45A5P0DMU8 189 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 CT45A7P0DMV0 189 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 PSMB6P28072 239 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 VAMP3Q15836 100 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 PSG3Q16557 428 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 MORN2Q502X0 79 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 GLT8D1Q68CQ7 371 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 RNASEKQ6P5S7 137 aaKnown RBP3.02□□□□□ -1.93
BRCA1-217ENST00000487825 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-217ENST00000487825 SUMF2Q8NBJ7 301 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 OR5D18Q8NGL1 313 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 GNPDA2Q8TDQ7 276 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 PP6455Q8WZ26 134 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 PHYHIPQ92561 330 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 C10orf35Q96D05 121 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 MRPS24Q96EL2 167 aaKnown RBP3.02□□□□□ -1.93
BRCA1-217ENST00000487825 OPALINQ96PE5 141 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 TSNAXQ99598 290 aaKnown RBP3.02□□□□□ -1.93
BRCA1-217ENST00000487825 CMC2Q9NRP2 79 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 TMEM14BQ9NUH8 114 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 ENOPH1Q9UHY7 261 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 OR52A1Q9UKL2 312 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 BAIAP2Q9UQB8 552 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 UFC1Q9Y3C8 167 aa3.02□□□□□ -1.93
BRCA1-217ENST00000487825 FAM32AQ9Y421 112 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms