RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.43□□□□□ -2.02
CUL3-211ENST00000487558 LRRC28Q86X40 367 aaPredicted RBP2.43□□□□□ -2.02
CUL3-211ENST00000487558 OR8B12Q8NGG6 310 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 OR13C6PQ8NH95 151 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BHQ93079 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BNQ99877 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 HIST1H2BMQ99879 126 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 AIF1LQ9BQI0 150 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 CHST6Q9GZX3 395 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 FAM107BQ9H098 131 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 FBXL12Q9NXK8 326 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 NUP155O75694 1391 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 MYH10P35580 1976 aa2.43□□□□□ -2.02
CUL3-211ENST00000487558 PLXNA3P51805 1871 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 A0A087WUJ7 227 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 A0A1B0GVG6 124 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 OR4C46A6NHA9 309 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 HMSDA8MTL9 139 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 FABP5P3A8MUU1 101 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 FAAHO00519 579 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 SLC22A1O15245 554 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 CRYZL1O95825 349 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 SERPINA7P05543 415 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 CRHP06850 196 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 NFYAP23511 347 aaPredicted RBP2.42□□□□□ -2.02
CUL3-211ENST00000487558 PSMD8P48556 350 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 HBA1P69905 142 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 IBA57Q5T440 356 aaKnown RBP2.42□□□□□ -2.02
CUL3-211ENST00000487558 TEX36Q5VZQ5 186 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 RPL22L1Q6P5R6 122 aaKnown RBP2.42□□□□□ -2.02
CUL3-211ENST00000487558 PHF13Q86YI8 300 aaPredicted RBP2.42□□□□□ -2.02
CUL3-211ENST00000487558 TMEM35BQ8NCS4 154 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 TSPAN32Q96QS1 320 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 NDUFAF1Q9Y375 327 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 TMEM56-RWDD3S4R434 201 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 PIK3C2GO75747 1445 aa2.42□□□□□ -2.02
CUL3-211ENST00000487558 DOCK5Q9H7D0 1870 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 DOCK3Q8IZD9 2030 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 FAM159BA6NKW6 160 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 OVOL1O14753 267 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 IGKV1-16P04430 117 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 GNG3P63215 75 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 AADACL3Q5VUY0 350 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 TMEM86AQ8N2M4 240 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 MAFIPQ8WZ33 124 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 KLF6Q99612 283 aaPredicted RBP2.41□□□□□ -2.02
CUL3-211ENST00000487558 TMEM147Q9BVK8 224 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 ARHGAP32A7KAX9 2087 aa2.41□□□□□ -2.02
CUL3-211ENST00000487558 TRAV26-2A0A0B4J265 109 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 ZNF705FA8MVS1 300 aaPredicted RBP2.4□□□□□ -2.03
CUL3-211ENST00000487558 PDE6DO43924 150 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 PFDN1O60925 122 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 NBEAP1P0C6P0 100 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 DEFA4P12838 97 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 IDO1P14902 403 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 EVX1P49640 407 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 OOSP2Q86WS3 158 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 STX19Q8N4C7 294 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 ZNF439Q8NDP4 499 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 OR51A2Q8NGJ7 313 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 OR13C4Q8NGS5 318 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 BORCS5Q969J3 196 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 DERL1Q9BUN8 251 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 MIXL1Q9H2W2 232 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 PYCARDQ9ULZ3 195 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 ERGIC3Q9Y282 383 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 HSPB11Q9Y547 144 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 VWDEQ8N2E2 1590 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 SCN9AQ15858 1988 aa2.4□□□□□ -2.03
CUL3-211ENST00000487558 MYO9BQ13459 2157 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 A0A0D9SEW6 157 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 EXOC1LA0A1B0GW35 172 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 DPRXA6NFQ7 191 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 GPR31O00270 319 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 PIRO00625 290 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 PGLYRP1O75594 196 aaPredicted RBP2.39□□□□□ -2.03
CUL3-211ENST00000487558 SCGB1A1P11684 91 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 S100GP29377 79 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 RPS20P60866 119 aaKnown RBP2.39□□□□□ -2.03
CUL3-211ENST00000487558 NDUFA5Q16718 116 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 FAM27BQ5VT28 67 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 GRINAQ7Z429 371 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 OR10K1Q8NGX5 313 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 SKA2Q8WVK7 121 aaPredicted RBP2.39□□□□□ -2.03
CUL3-211ENST00000487558 GPER1Q99527 375 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 GINS3Q9BRX5 216 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 SPANXA1Q9NS26 97 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 IDI2-AS1Q9NZ38 188 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 UTP11Q9Y3A2 253 aaKnown RBP2.39□□□□□ -2.03
CUL3-211ENST00000487558 UFC1Q9Y3C8 167 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 TAF1LQ8IZX4 1826 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 YTHDC2Q9H6S0 1430 aaKnown RBP2.39□□□□□ -2.03
CUL3-211ENST00000487558 NCOA3Q9Y6Q9 1424 aa2.39□□□□□ -2.03
CUL3-211ENST00000487558 CPDO75976 1380 aa2.38□□□□□ -2.03
CUL3-211ENST00000487558 KIF1BO60333 1816 aa2.38□□□□□ -2.03
CUL3-211ENST00000487558 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
CUL3-211ENST00000487558 TRBV10-2A0A0K0K1G8 114 aa2.38□□□□□ -2.03
CUL3-211ENST00000487558 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms