RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 CRISP2P16562 243 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 APOBEC1P41238 236 aaKnown RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 RPS24P62847 133 aaKnown RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 HES1Q14469 280 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 WFDC2Q14508 124 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 ZNF678Q5SXM1 525 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 SLC25A47Q6Q0C1 308 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 CYP2G1PQ6ZSU1 146 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 FOXL2NBQ6ZUU3 175 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 MEX3DQ86XN8 651 aaKnown RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 CLDN19Q8N6F1 224 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 OR4X2Q8NGF9 303 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 OR51H1Q8NH63 302 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 SGMS2Q8NHU3 365 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 MRPL24Q96A35 216 aaKnown RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 SLC25A44Q96H78 314 aaPredicted RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 AMELYQ99218 206 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 ATP5SQ99766 215 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 C20orf78Q9BR46 151 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 JPT2Q9H910 190 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 TVP23BQ9NYZ1 205 aa4.36□□□□□ -1.71
COPS3-209ENST00000486810 WRAP73Q9P2S5 460 aaPredicted RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 RCL1Q9Y2P8 373 aaKnown RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 COL1A1P02452 1464 aaPredicted RBP4.36□□□□□ -1.71
COPS3-209ENST00000486810 DAPL1A0PJW8 107 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 LILRA5A6NI73 299 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 LRRC30A6NM36 301 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 C15orf61A6NNL5 157 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 M0R2P5 195 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 UQCRQO14949 82 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 ARL6IP5O75915 188 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SERF1AO75920 110 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 ATP5G1P05496 136 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 H2BFMP0C1H6 154 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SP9P0CG40 484 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 VPREB1P12018 145 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 GP9P14770 177 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 MDKP21741 143 aaPredicted RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 GATA2P23769 480 aaPredicted RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 ATP5G3P48201 142 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 NMUP48645 174 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SSR4P51571 173 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 RPS14P62263 151 aaKnown RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 SNRPFP62306 86 aaKnown RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 HERVK_113P63121 156 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 ZNF141Q15928 474 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 LRRC37A5PQ49AS3 106 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SYT14P1Q58G82 188 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 IBA57Q5T440 356 aaKnown RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 SLC35E4Q6ICL7 350 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 ANKRD37Q7Z713 158 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 TRPT1Q86TN4 253 aaKnown RBP4.35□□□□□ -1.71
COPS3-209ENST00000486810 MSRB3Q8IXL7 192 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 TDHQ8IZJ6 230 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 C3orf22Q8N5N4 141 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 OR8B3Q8NGG8 313 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 CLDND2Q8NHS1 167 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 STAG3L4Q8TBR4 150 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 PIFOQ8TCI5 191 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 CT55Q8WUE5 264 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 GATAD1Q8WUU5 269 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 PRELID3AQ96N28 172 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 OR8B2Q96RD0 313 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 PBOV1Q9GZY1 135 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 PELI2Q9HAT8 420 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 PRO0461Q9UI25 63 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 NSG2Q9Y328 171 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 FIS1Q9Y3D6 152 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 OR2W1Q9Y3N9 320 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 LY75O60449 1722 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 STRCP1A6NGW2 1772 aa4.35□□□□□ -1.71
COPS3-209ENST00000486810 A0A1B0GV50 99 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 LOC107986453A0A1B0GWG9 222 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 FCN1O00602 326 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 OVOL1O14753 267 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 HCRTO43612 131 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ANGPTL7O43827 346 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 GPR137BO60478 399 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ZNF324O75467 553 aaPredicted RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 NDUFC2O95298 119 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 LSM8O95777 96 aaKnown RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 KLK2P20151 261 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 RBM11P57052 281 aaKnown RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 HILS1P60008 231 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 RPS4XP62701 263 aaKnown RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 POLR2LP62875 67 aaKnown RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 RRN3P1Q2M238 152 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 ETDBQ3ZM63 59 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 SPRNQ5BIV9 151 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 NMSQ5H8A3 153 aa4.34□□□□□ -1.71
COPS3-209ENST00000486810 KLF17Q5JT82 389 aaPredicted RBP4.34□□□□□ -1.71
COPS3-209ENST00000486810 OR4C11Q6IEV9 310 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms