RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TRAV14DV4A0A0A6YYC5 116 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 PSMD12O00232 456 aaPredicted RBP0.8□□□□□ -2.28
LTN1-206ENST00000486427 GEMIN2O14893 280 aaKnown RBP0.8□□□□□ -2.28
LTN1-206ENST00000486427 OR5F1O95221 314 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 HLA-DRB1P01911 266 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 FKBP2P26885 142 aaKnown RBP0.8□□□□□ -2.28
LTN1-206ENST00000486427 UBE2IP63279 158 aaKnown RBP0.8□□□□□ -2.28
LTN1-206ENST00000486427 DEFB115Q30KQ5 88 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 C20orf196Q8IYI0 205 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 OR4D11Q8NGI4 311 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 IMP4Q96G21 291 aaKnown RBP0.8□□□□□ -2.28
LTN1-206ENST00000486427 NIPSNAP1Q9BPW8 284 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 PRTFDC1Q9NRG1 225 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 MICAL3Q7RTP6 2002 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 NUP155O75694 1391 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 ARFGEF3Q5TH69 2177 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 ROS1P08922 2347 aa0.8□□□□□ -2.28
LTN1-206ENST00000486427 POLEQ07864 2286 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 FAAHO00519 579 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 CRYGAP11844 174 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 CD79AP11912 226 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 PSME3P61289 254 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 IMPG1Q17R60 797 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 TOMM6Q96B49 74 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 PPP1R2P1Q96PQ5 205 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 TSPAN32Q96QS1 320 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 PARD6GQ9BYG4 376 aaPredicted RBP0.79□□□□□ -2.28
LTN1-206ENST00000486427 C11orf68Q9H3H3 251 aaKnown RBP0.79□□□□□ -2.28
LTN1-206ENST00000486427 SNURFQ9Y675 71 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 CCDC88AQ3V6T2 1871 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 RIC1Q4ADV7 1423 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 HECW2Q9P2P5 1572 aa0.79□□□□□ -2.28
LTN1-206ENST00000486427 DPRXA6NFQ7 191 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 C19orf84I3L1E1 186 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 CHP2O43745 196 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 AHSA1O95433 338 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 TNNC2P02585 160 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 IFNA16P05015 189 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 COX6A1P12074 109 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 RPL5P46777 297 aaKnown RBP0.78□□□□□ -2.28
LTN1-206ENST00000486427 SULT1A1P50225 295 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 CDK10Q15131 360 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 ACOT6Q3I5F7 207 aaPredicted RBP0.78□□□□□ -2.28
LTN1-206ENST00000486427 CCDC122Q5T0U0 273 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 LPCAT3Q6P1A2 487 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 MIR17HGQ75NE6 70 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 BPIFA4PQ86YQ2 179 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 OTUD6BQ8N6M0 293 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 H1FXQ92522 213 aaKnown RBP0.78□□□□□ -2.28
LTN1-206ENST00000486427 SLC50A1Q9BRV3 221 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 MRPL27Q9P0M9 148 aaKnown RBP0.78□□□□□ -2.28
LTN1-206ENST00000486427 PKIGQ9Y2B9 76 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 NOSIPQ9Y314 301 aaKnown RBP0.78□□□□□ -2.28
LTN1-206ENST00000486427 TMEM56-RWDD3S4R434 201 aa0.78□□□□□ -2.28
LTN1-206ENST00000486427 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.29
LTN1-206ENST00000486427 LOC110117498A0A087WWA1 95 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 EXOC1LA0A1B0GW35 172 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 C2orf70A6NJV1 201 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 BUB1B-PAK6H3BSN5 160 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 M0R036 132 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 OR2T1O43869 369 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 FADS1O60427 444 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 IFNA10P01566 189 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 SPI1P17947 270 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 RPS20P60866 119 aaKnown RBP0.77□□□□□ -2.29
LTN1-206ENST00000486427 PDE6HQ13956 83 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 KCNJ8Q15842 424 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 CLVS1Q8IUQ0 354 aaPredicted RBP0.77□□□□□ -2.29
LTN1-206ENST00000486427 FAM19A2Q8N3H0 131 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 COMMD5Q9GZQ3 224 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 MIXL1Q9H2W2 232 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 NEO1Q92859 1461 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 KIF13BQ9NQT8 1826 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 TNRC6BQ9UPQ9 1833 aaKnown RBP0.77□□□□□ -2.29
LTN1-206ENST00000486427 ALPK2Q86TB3 2170 aa0.77□□□□□ -2.29
LTN1-206ENST00000486427 ANAPC1Q9H1A4 1944 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 HECW1Q76N89 1606 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 A0A0D9SG52 128 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 PQLC2LA1A4F0 135 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 NIPSNAP2O75323 286 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 SERPINA6P08185 405 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 ASAH2BP0C7U1 165 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 MIFP14174 115 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 SPANXN5Q5MJ07 72 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 LINC00471Q8N535 108 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 LINC00311Q8N616 119 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 ANKRD29Q8N6D5 301 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 SIGLECL1Q8N7X8 197 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 GINS4Q9BRT9 223 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 C20orf27Q9GZN8 174 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 VPS29Q9UBQ0 182 aa0.76□□□□□ -2.29
LTN1-206ENST00000486427 RP1P56715 2156 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 TRAV9-1A0A075B6T8 112 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 A0A087WX48 190 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 TRAV26-2A0A0B4J265 109 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 GOLGA6L19H0YKK7 550 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 OR1I1O60431 355 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 OR2J2O76002 312 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 BRS3P32247 399 aa0.75□□□□□ -2.29
LTN1-206ENST00000486427 CDC42P60953 191 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms