RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 MFAP4P55083 255 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 PYDC2Q56P42 97 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 SLC16A13Q7RTY0 426 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 PRRT1Q99946 306 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
COL6A1-204ENST00000486023 ANKRD20A5PA0PJZ0 165 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 F8W735 103 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-204ENST00000486023 I3L2K1 104 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 NDUFA4O00483 81 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
COL6A1-204ENST00000486023 GSTZ1O43708 216 aaPredicted RBP13.27□□□□□ -0.29
COL6A1-204ENST00000486023 CTSGP08311 255 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 UCP1P25874 307 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 ADMP35318 185 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 MARC2Q969Z3 335 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 PRR13Q9NZ81 148 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 GPR132Q9UNW8 380 aa13.27□□□□□ -0.29
COL6A1-204ENST00000486023 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 NXPH3O95157 252 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
COL6A1-204ENST00000486023 TMEM268Q5VZI3 342 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 Q6ZRM9 215 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 SELENOHQ8IZQ5 122 aaKnown RBP13.26□□□□□ -0.29
COL6A1-204ENST00000486023 LHFPL5Q8TAF8 219 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 RETNQ9HD89 108 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 SCP2D1Q9UJQ7 156 aa13.26□□□□□ -0.29
COL6A1-204ENST00000486023 GNG7O60262 68 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 B3GALNT1O75752 331 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 CDS2O95674 445 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 P0C879 139 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 C8orf88P0DMB2 117 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 AKR1C4P17516 323 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL6A1-204ENST00000486023 DHODHQ02127 395 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 SURF2Q15527 256 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-204ENST00000486023 GLYATL2Q8WU03 294 aa13.25□□□□□ -0.29
COL6A1-204ENST00000486023 NXF2Q9GZY0 626 aaKnown RBP13.25□□□□□ -0.29
COL6A1-204ENST00000486023 DAZ1Q9NQZ3 744 aaKnown RBP13.25□□□□□ -0.29
COL6A1-204ENST00000486023 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
COL6A1-204ENST00000486023 IGHV3OR16-13A0A075B7E8 117 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 IGHV3-74A0A0B4J1X5 117 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 RBMY1EA6NEQ0 496 aaKnown RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 RBMY1DP0C7P1 496 aaKnown RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 S100A5P33763 92 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 RELQ04864 619 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 ANKRD55Q3KP44 614 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 LAMTOR1Q6IAA8 161 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 DUSP18Q8NEJ0 188 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 RBPMSQ93062 196 aaKnown RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 SOSTQ9BQB4 213 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-204ENST00000486023 UBQLN2Q9UHD9 624 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 KCNIP3Q9Y2W7 256 aa13.24□□□□□ -0.29
COL6A1-204ENST00000486023 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
COL6A1-204ENST00000486023 SCGB3A2Q96PL1 93 aa13.23□□□□□ -0.29
COL6A1-204ENST00000486023 TXN2Q99757 166 aa13.23□□□□□ -0.29
COL6A1-204ENST00000486023 HEYLQ9NQ87 328 aaPredicted RBP13.23□□□□□ -0.29
COL6A1-204ENST00000486023 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
COL6A1-204ENST00000486023 IGKV3-7A0A075B6H7 116 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 TRAV25A0A0B4J276 109 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 RNASE2P10153 161 aaKnown RBP13.22□□□□□ -0.29
COL6A1-204ENST00000486023 NPBWR1P48145 328 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 TFPI2P48307 235 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 MLANAQ16655 118 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 ZFAND6Q6FIF0 208 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 TMED4Q7Z7H5 227 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 TOMM5Q8N4H5 51 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
COL6A1-204ENST00000486023 KMT2CQ8NEZ4 4911 aaKnown RBP13.21□□□□□ -0.29
COL6A1-204ENST00000486023 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 C15orf62A8K5M9 175 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 C3orf84H3BNL1 204 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 K7EMT4 169 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 LYL1P12980 280 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
COL6A1-204ENST00000486023 OPRK1P41145 380 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 SPCS3P61009 180 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 FAM219AQ8IW50 185 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 TMEM116Q8NCL8 245 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 TMEM230Q96A57 120 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 CITED4Q96RK1 184 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
COL6A1-204ENST00000486023 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
COL6A1-204ENST00000486023 TMEM187Q14656 261 aa13.2□□□□□ -0.3
COL6A1-204ENST00000486023 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
COL6A1-204ENST00000486023 RNF2Q99496 336 aa13.2□□□□□ -0.3
COL6A1-204ENST00000486023 RHPN1-AS1Q9BWJ2 59 aa13.2□□□□□ -0.3
COL6A1-204ENST00000486023 HIPK2Q9H2X6 1198 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms