RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 A0A0G2JK05 382 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 MUC21A0A0G2JKD1 596 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 MUC21A0A140T8X8 626 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 TCF21O43680 179 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 YPEL1O60688 119 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 CD24P25063 80 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 YPEL2Q96QA6 119 aa8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 MRPL16Q9NX20 251 aaKnown RBP8.86□□□□□ -0.99
SRGAP3-207ENST00000485983 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 UPK2O00526 184 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 CD5P06127 495 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 CD59P13987 128 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 PHLDA1Q8WV24 401 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TM2D1Q9BX74 207 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 OTORQ9NRC9 128 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TRAV41A0A0B4J266 112 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 VENTXO95231 258 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 SRD5A1P18405 259 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TIMP3P35625 211 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ZCCHC24Q8N2G6 241 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TNFRSF14Q92956 283 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 RNF125Q96EQ8 232 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 RPP21Q9H633 154 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 WNK3Q9BYP7 1800 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF672Q499Z4 452 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 WFDC6Q9BQY6 131 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ELF5Q9UKW6 265 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 DANCRP0C864 163 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ZNF324BQ6AW86 544 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 C10orf126Q8N4M7 172 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TMEM86BQ8N661 226 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 PRR32B1ATL7 298 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 TIMM23O14925 209 aa8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 PRB3Q04118 309 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 ZFP36L1Q07352 338 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-207ENST00000485983 SAA2-SAA4A0A096LPE2 208 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 OVOL1O14753 267 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 SAA2P0DJI9 122 aaPredicted RBP8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 ORMDL3Q8N138 153 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 CEP250Q9BV73 2442 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 IGLV3-12A0A075B6K2 115 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 GCM2O75603 506 aaPredicted RBP8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 EGR1P18146 543 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 ASCL4Q6XD76 172 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 UCP1P25874 307 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 TDGF1P3P51864 188 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 C1QL2Q7Z5L3 287 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 TMEM144Q7Z5S9 345 aa8.84□□□□□ -0.99
SRGAP3-207ENST00000485983 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 CD200R1LQ6Q8B3 271 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 IGHV1-18A0A0C4DH31 117 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 SOD3P08294 240 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 FBLN7Q53RD9 439 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 ZNF660Q6AZW8 331 aaPredicted RBP8.83□□□□□ -1
SRGAP3-207ENST00000485983 SLC25A16P16260 332 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 FHITP49789 147 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 RNF166Q96A37 237 aaPredicted RBP8.83□□□□□ -1
SRGAP3-207ENST00000485983 RCC1LQ96I51 464 aaKnown RBP8.83□□□□□ -1
SRGAP3-207ENST00000485983 PLXNB2O15031 1838 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 TMEM8BA6NDV4 472 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -1
SRGAP3-207ENST00000485983 LINC00527Q9UJ94 153 aa8.83□□□□□ -1
SRGAP3-207ENST00000485983 PQLC2LA1A4F0 135 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 WBP1Q96G27 269 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 SDHCQ99643 169 aaPredicted RBP8.82□□□□□ -1
SRGAP3-207ENST00000485983 CRIM1Q9NZV1 1036 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 ARFGEF1Q9Y6D6 1849 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 CKS1BP61024 79 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 IGHV1-46P01743 117 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 TFF3Q07654 80 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 RNF182Q8N6D2 247 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 IL36BQ9NZH7 164 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 SPRR3Q9UBC9 169 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 CNOT1A5YKK6 2376 aaKnown RBP8.82□□□□□ -1
SRGAP3-207ENST00000485983 CBLN1P23435 193 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 MORN2Q502X0 79 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 MIR17HGQ75NE6 70 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 VWCEQ96DN2 955 aa8.82□□□□□ -1
SRGAP3-207ENST00000485983 ZNF837Q96EG3 531 aaPredicted RBP8.82□□□□□ -1
SRGAP3-207ENST00000485983 TBL2Q9Y4P3 447 aaKnown RBP8.82□□□□□ -1
SRGAP3-207ENST00000485983 CACNA1EQ15878 2313 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 OOSP1A8MZH6 123 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 GATA2P23769 480 aaPredicted RBP8.81□□□□□ -1
SRGAP3-207ENST00000485983 MINOS1Q5TGZ0 78 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 SIGLEC15Q6ZMC9 328 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 WFIKKN1Q96NZ8 548 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 ZNF257Q9Y2Q1 563 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 MINOS1-NBL1R4GNA1 71 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 HEATR5BQ9P2D3 2071 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 IGKV1D-43A0A0B4J1Z2 117 aa8.81□□□□□ -1
SRGAP3-207ENST00000485983 SIGLEC5O15389 551 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms