RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SLC35D1Q9NTN3 355 aa18.34■□□□□ 0.53
CLN5-202ENST00000485938 TRAV17A0A0B4J275 112 aa18.33■□□□□ 0.53
CLN5-202ENST00000485938 BMPR1BO00238 502 aa18.33■□□□□ 0.53
CLN5-202ENST00000485938 C8orf88P0DMB2 117 aa18.33■□□□□ 0.53
CLN5-202ENST00000485938 RNASE2P10153 161 aaKnown RBP18.33■□□□□ 0.53
CLN5-202ENST00000485938 LINC00574Q9H8X3 128 aa18.33■□□□□ 0.53
CLN5-202ENST00000485938 MGST1P10620 155 aaKnown RBP18.33■□□□□ 0.52
CLN5-202ENST00000485938 GLRXP35754 106 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 GATA4P43694 442 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 AMTP48728 403 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 MRPL54Q6P161 138 aaKnown RBP18.33■□□□□ 0.52
CLN5-202ENST00000485938 VHLLQ6RSH7 139 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 SEM1Q6ZVN7 128 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 OR1L8Q8NGR8 309 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 LOXL4Q96JB6 756 aa18.33■□□□□ 0.52
CLN5-202ENST00000485938 ZNF253O75346 499 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 HLA-DQA1P01909 254 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 SRIP30626 198 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 SLC25A48Q6ZT89 311 aaKnown RBP18.32■□□□□ 0.52
CLN5-202ENST00000485938 GAFA1Q96PS6 74 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 RNF7Q9UBF6 113 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 PCNX2A6NKB5 2137 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 DLEU1O43261 78 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 FAM167A-AS1Q96KT0 104 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 ZNRD1Q9P1U0 126 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 CDC42EP3Q9UKI2 254 aa18.32■□□□□ 0.52
CLN5-202ENST00000485938 IGLV3-9A0A075B6K5 115 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 SAA1P0DJI8 122 aaPredicted RBP18.31■□□□□ 0.52
CLN5-202ENST00000485938 CTRLP40313 264 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 CD69Q07108 199 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 OR5B3Q8NH48 314 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 BET1LQ9NYM9 111 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 RAI1Q7Z5J4 1906 aaPredicted RBP18.31■□□□□ 0.52
CLN5-202ENST00000485938 PSMB11A5LHX3 300 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 PMCHP20382 165 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 MORN5Q5VZ52 161 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 DEFB108BQ8NET1 73 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 OR10W1Q8NGF6 305 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 SLC25A2Q9BXI2 301 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 SERTAD4Q9NUC0 356 aa18.31■□□□□ 0.52
CLN5-202ENST00000485938 RPUSD1Q9UJJ7 312 aaKnown RBP18.31■□□□□ 0.52
CLN5-202ENST00000485938 LOC400499M0QZD8 3231 aa18.3■□□□□ 0.52
CLN5-202ENST00000485938 ZNF324O75467 553 aaPredicted RBP18.3■□□□□ 0.52
CLN5-202ENST00000485938 GAGE1Q13065 139 aa18.3■□□□□ 0.52
CLN5-202ENST00000485938 CCL13Q99616 98 aa18.3■□□□□ 0.52
CLN5-202ENST00000485938 MRPL32Q9BYC8 188 aaKnown RBP18.3■□□□□ 0.52
CLN5-202ENST00000485938 LPAR2Q9HBW0 351 aa18.3■□□□□ 0.52
CLN5-202ENST00000485938 CACNA1HO95180 2353 aa18.3■□□□□ 0.52
CLN5-202ENST00000485938 IZUMO1RA6ND01 250 aa18.29■□□□□ 0.52
CLN5-202ENST00000485938 FAM216BQ8N7L0 139 aa18.29■□□□□ 0.52
CLN5-202ENST00000485938 TRAV5A0A0B4J249 113 aa18.29■□□□□ 0.52
CLN5-202ENST00000485938 TIMM23BQ5SRD1 257 aa18.29■□□□□ 0.52
CLN5-202ENST00000485938 MBD3L4A6NDZ8 208 aaPredicted RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 MBD3L3A6NE82 208 aaPredicted RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 MBD3L5A6NJ08 208 aaPredicted RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 CA1P00915 261 aaPredicted RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 APCSP02743 223 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 NIT1Q86X76 327 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 MBD3L2Q8NHZ7 208 aaPredicted RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 FAM168AQ92567 244 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 COMMD5Q9GZQ3 224 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 GOLT1BQ9Y3E0 138 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 YLPM1P49750 1951 aaKnown RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 TM4SF5O14894 197 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 REG1AP05451 166 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 UBE2L3P68036 154 aaKnown RBP18.28■□□□□ 0.52
CLN5-202ENST00000485938 BATFQ16520 125 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 TMEM30BQ3MIR4 351 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 ZNF788Q6ZQV5 615 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 NHLRC2Q8NBF2 726 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 LINC00479Q96M42 142 aa18.28■□□□□ 0.52
CLN5-202ENST00000485938 SPENQ96T58 3664 aaKnown RBP18.27■□□□□ 0.52
CLN5-202ENST00000485938 CYB5R2Q6BCY4 276 aa18.27■□□□□ 0.52
CLN5-202ENST00000485938 ZNF474Q6S9Z5 364 aaPredicted RBP18.27■□□□□ 0.52
CLN5-202ENST00000485938 OR2T6Q8NHC8 308 aa18.27■□□□□ 0.52
CLN5-202ENST00000485938 CACNG8Q8WXS5 425 aa18.27■□□□□ 0.52
CLN5-202ENST00000485938 RND1Q92730 232 aa18.27■□□□□ 0.52
CLN5-202ENST00000485938 SNRNP40Q96DI7 357 aaKnown RBP18.27■□□□□ 0.52
CLN5-202ENST00000485938 ZNF714Q96N38 554 aa18.27■□□□□ 0.52
CLN5-202ENST00000485938 SVILO95425 2214 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 NPSP0C0P6 89 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 TNFAIP6P98066 277 aaPredicted RBP18.27■□□□□ 0.51
CLN5-202ENST00000485938 SPATA45Q537H7 98 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 TSKUQ8WUA8 353 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 DNAJC4Q9NNZ3 241 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 NDUFA4L2Q9NRX3 87 aa18.27■□□□□ 0.51
CLN5-202ENST00000485938 IGHV1-46P01743 117 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 C3orf79P0CE67 100 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 WT1P19544 449 aaPredicted RBP18.26■□□□□ 0.51
CLN5-202ENST00000485938 USF1P22415 310 aaPredicted RBP18.26■□□□□ 0.51
CLN5-202ENST00000485938 PRRX1P54821 245 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 SLAQ13239 276 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 ICE1Q9Y2F5 2266 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 DLL1O00548 723 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 ASPHD1Q5U4P2 390 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 ZNF833PQ6ZTB9 187 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 WIPF2Q8TF74 440 aaPredicted RBP18.26■□□□□ 0.51
CLN5-202ENST00000485938 MBD6Q96DN6 1003 aa18.26■□□□□ 0.51
CLN5-202ENST00000485938 ZNF331Q9NQX6 463 aaPredicted RBP18.26■□□□□ 0.51
CLN5-202ENST00000485938 OSR1Q8TAX0 266 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms