RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 TNFRSF9Q07011 255 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 PMS2P11Q13670 270 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 LYG2Q86SG7 212 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 MRGPRFQ96AM1 343 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 TXN2Q99757 166 aa12.71□□□□□ -0.37
SMC4-216ENST00000485645 IGHV7-4-1A0A0J9YVY3 117 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 I3L2K1 104 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 RPL35AP18077 110 aaKnown RBP12.7□□□□□ -0.38
SMC4-216ENST00000485645 HSPE1P61604 102 aaKnown RBP12.7□□□□□ -0.38
SMC4-216ENST00000485645 ERHP84090 104 aaKnown RBP12.7□□□□□ -0.38
SMC4-216ENST00000485645 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 TMEM116Q8NCL8 245 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 OR52I2Q8NH67 350 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 GALNT14Q96FL9 552 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 OR10C1Q96KK4 312 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 RNF2Q99496 336 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 KLK11Q9UBX7 282 aa12.7□□□□□ -0.38
SMC4-216ENST00000485645 CHEK1O14757 476 aa12.69□□□□□ -0.38
SMC4-216ENST00000485645 MT-CO2P00403 227 aa12.69□□□□□ -0.38
SMC4-216ENST00000485645 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
SMC4-216ENST00000485645 PINX1Q96BK5 328 aaKnown RBP12.69□□□□□ -0.38
SMC4-216ENST00000485645 RNF183Q96D59 192 aa12.69□□□□□ -0.38
SMC4-216ENST00000485645 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
SMC4-216ENST00000485645 SLIRPQ9GZT3 109 aaKnown RBP12.69□□□□□ -0.38
SMC4-216ENST00000485645 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
SMC4-216ENST00000485645 NXF2Q9GZY0 626 aaKnown RBP12.69□□□□□ -0.38
SMC4-216ENST00000485645 MTFP1Q9UDX5 166 aa12.69□□□□□ -0.38
SMC4-216ENST00000485645 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 TRAV14DV4A0A0A6YYC5 116 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 NUPR2A6NF83 97 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 M0QYG6 137 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 GNG7O60262 68 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
SMC4-216ENST00000485645 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMC4-216ENST00000485645 MAP6D1Q9H9H5 199 aa12.68□□□□□ -0.38
SMC4-216ENST00000485645 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 PGAM2P15259 253 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 TBPP20226 339 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 TFPI2P48307 235 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 RND3P61587 244 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
SMC4-216ENST00000485645 APRG1Q8IVJ8 170 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 ZNF486Q96H40 463 aaPredicted RBP12.67□□□□□ -0.38
SMC4-216ENST00000485645 DIRAS2Q96HU8 199 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
SMC4-216ENST00000485645 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
SMC4-216ENST00000485645 IGKV3-7A0A075B6H7 116 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 ATF4P18848 351 aaPredicted RBP12.66□□□□□ -0.38
SMC4-216ENST00000485645 NPBWR1P48145 328 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
SMC4-216ENST00000485645 IZUMO4Q1ZYL8 232 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
SMC4-216ENST00000485645 TMEM217Q8N7C4 229 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
SMC4-216ENST00000485645 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
SMC4-216ENST00000485645 IGHV3OR16-13A0A075B7E8 117 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 IGHV3-74A0A0B4J1X5 117 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CTDSPLO15194 276 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 ATG12O94817 140 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 LY6G6CO95867 125 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CD3DP04234 171 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CD5P06127 495 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 PI3P19957 117 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 SNCAP37840 140 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 AKR1C2P52895 323 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 PIGPP57054 158 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 PAFAH1B2P68402 229 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
SMC4-216ENST00000485645 ARRDC1Q8N5I2 433 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 TMEM229BQ8NBD8 167 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 DUSP18Q8NEJ0 188 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 CSTL1Q9H114 145 aa12.65□□□□□ -0.38
SMC4-216ENST00000485645 IFNA17P01571 189 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 IGKV1-5P01602 117 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 CD74P04233 296 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 TAS2R19P59542 299 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 IL18Q14116 193 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 ZNF124Q15973 351 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 FAM90A2PQ658T7 463 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 TOMM20LQ6UXN7 152 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 TCF24Q7RTU0 167 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 LHFPL1Q86WI0 220 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 GBGT1Q8N5D6 347 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 SLC35G3Q8N808 338 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 SMIM4Q8WVI0 70 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 TP53RKQ96S44 253 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 PDCD10Q9BUL8 212 aa12.64□□□□□ -0.39
SMC4-216ENST00000485645 RSL24D1Q9UHA3 163 aaKnown RBP12.64□□□□□ -0.39
SMC4-216ENST00000485645 KLK5Q9Y337 293 aaPredicted RBP12.64□□□□□ -0.39
SMC4-216ENST00000485645 A0A0B4J293 547 aa12.63□□□□□ -0.39
SMC4-216ENST00000485645 C3orf85A0A1B0GTC6 90 aa12.63□□□□□ -0.39
SMC4-216ENST00000485645 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
SMC4-216ENST00000485645 INS-IGF2F8WCM5 200 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms