RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 GNG3P63215 75 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 MAJINQ3KP22 176 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 CEACAM21Q3KPI0 293 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 STUMQ69YW2 141 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 LCN15Q6UWW0 184 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 SAXO1Q8IYX7 474 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 DYRK2Q92630 601 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 RBKSQ9H477 322 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 FKBP11Q9NYL4 201 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 RPUSD1Q9UJJ7 312 aaKnown RBP8.73□□□□□ -1.01
DDX56-212ENST00000485367 CENPVL3A0A0U1RRI6 287 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 F2RP25116 425 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 CNN1P51911 297 aaKnown RBP8.73□□□□□ -1.01
DDX56-212ENST00000485367 LRRC10Q5BKY1 277 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 PLCXD3Q63HM9 321 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 C16orf54Q6UWD8 224 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 Q6ZPA2 131 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
DDX56-212ENST00000485367 LHX4Q969G2 390 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 C20orf144Q9BQM9 153 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 SIRPDQ9H106 197 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 ONECUT1Q9UBC0 465 aa8.73□□□□□ -1.01
DDX56-212ENST00000485367 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 FAM90A26D6RGX4 464 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
DDX56-212ENST00000485367 SYNGR2O43760 224 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 RHBDL1O75783 438 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
DDX56-212ENST00000485367 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 FOXL1Q12952 345 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 PDCD1Q15116 288 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 SSX7Q7RTT5 188 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 OR5A2Q8NGI9 324 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 H1FXQ92522 213 aaKnown RBP8.72□□□□□ -1.01
DDX56-212ENST00000485367 CORO2AQ92828 525 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 RSG1Q9BU20 258 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 WDR61Q9GZS3 305 aaKnown RBP8.72□□□□□ -1.01
DDX56-212ENST00000485367 SLC39A9Q9NUM3 307 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 ZNF581Q9P0T4 197 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 NAGKQ9UJ70 344 aa8.72□□□□□ -1.01
DDX56-212ENST00000485367 TRBV6-6A0A0A6YYG2 114 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 A6NJY4 79 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 OR5B21A6NL26 309 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 PGLYRP1O75594 196 aaPredicted RBP8.71□□□□□ -1.01
DDX56-212ENST00000485367 SERPINE2P07093 398 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 GZMHP20718 246 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 GABRA2P47869 451 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 COL5A1-AS1Q5SY13 56 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 TEX38Q6PEX7 206 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 VMO1Q7Z5L0 202 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 LINC00596Q86U02 117 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 LY6G5BQ8NDX9 201 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 ORAOV1Q8WV07 137 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 TAF15Q92804 592 aaKnown RBP eCLIP8.71□□□□□ -1.01
DDX56-212ENST00000485367 GPR146Q96CH1 333 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 GAFA1Q96PS6 74 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 PSENENQ9NZ42 101 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 FUT9Q9Y231 359 aa8.71□□□□□ -1.01
DDX56-212ENST00000485367 PRB3Q04118 309 aaPredicted RBP8.71□□□□□ -1.02
DDX56-212ENST00000485367 ATP6V1FQ16864 119 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 BRICD5Q6PL45 260 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 Q6YL49 198 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 ZNF788Q6ZQV5 615 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 MRPL30Q8TCC3 161 aaKnown RBP8.71□□□□□ -1.02
DDX56-212ENST00000485367 DCTN5Q9BTE1 182 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 PARLQ9H300 379 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 DNAJC4Q9NNZ3 241 aa8.71□□□□□ -1.02
DDX56-212ENST00000485367 SLC25A10Q9UBX3 287 aaPredicted RBP8.71□□□□□ -1.02
DDX56-212ENST00000485367 IGKV1D-13A0A0B4J2D9 117 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 IGKV1-13P0DP09 117 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 PSG2P11465 335 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 MDKP21741 143 aaPredicted RBP8.7□□□□□ -1.02
DDX56-212ENST00000485367 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
DDX56-212ENST00000485367 RPS20P60866 119 aaKnown RBP8.7□□□□□ -1.02
DDX56-212ENST00000485367 PAFAH1B2P68402 229 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 TMEM267Q0VDI3 215 aaPredicted RBP8.7□□□□□ -1.02
DDX56-212ENST00000485367 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 TMEM37Q8WXS4 190 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 VSIRQ9H7M9 311 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 CCL28Q9NRJ3 127 aa8.7□□□□□ -1.02
DDX56-212ENST00000485367 AURKAIP1Q9NWT8 199 aaPredicted RBP8.7□□□□□ -1.02
DDX56-212ENST00000485367 IGKV1D-17A0A075B6S4 117 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 A0A0U1RQK1 487 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 C20orf202A1L168 122 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 NPIPB11E5RHQ5 1161 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 SYNGR1O43759 233 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 RPL15P61313 204 aaKnown RBP8.69□□□□□ -1.02
DDX56-212ENST00000485367 NECAP1Q8NC96 275 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 ZNRF1Q8ND25 227 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 OR2W1Q9Y3N9 320 aa8.69□□□□□ -1.02
DDX56-212ENST00000485367 TRAV9-1A0A075B6T8 112 aa8.68□□□□□ -1.02
DDX56-212ENST00000485367 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms