RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CKLFQ9UBR5 152 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 BAIAP2Q9UQB8 552 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 NEO1Q92859 1461 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 DIDO1Q9BTC0 2240 aaKnown RBP0.45□□□□□ -2.34
SCAF11-207ENST00000484275 ALPK2Q86TB3 2170 aa0.45□□□□□ -2.34
SCAF11-207ENST00000484275 LAMA4Q16363 1823 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 IGKV2D-26A0A0A0MRZ7 120 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 DPRXA6NFQ7 191 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 HCRTO43612 131 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 IFNA10P01566 189 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 HLA-DRB1P01911 266 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 TNNC2P02585 160 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 PMP2P02689 132 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 IFNA16P05015 189 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 COX6A1P12074 109 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 RNASE3P12724 160 aaKnown RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 HIST1H1TP22492 207 aaPredicted RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 EIF2B2P49770 351 aaKnown RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 SUPT4H1P63272 117 aaKnown RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 RUNX1Q01196 453 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 PLCXD2Q0VAA5 305 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 PMAIP1Q13794 54 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 CDK10Q15131 360 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 IMPG1Q17R60 797 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 SPANXN5Q5MJ07 72 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 ZNF826PQ6ZT77 177 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 AAED1Q7RTV5 226 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 C20orf196Q8IYI0 205 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 OR51D1Q8NGF3 324 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 OR5B17Q8NGF7 314 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 PFN4Q8NHR9 129 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 TMEM106AQ96A25 262 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 ARL5BQ96KC2 179 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 SERPINI1Q99574 410 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 DERL1Q9BUN8 251 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 PARVGQ9HBI0 331 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 CISHQ9NSE2 258 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 RP1P56715 2156 aa0.44□□□□□ -2.34
SCAF11-207ENST00000484275 WRNQ14191 1432 aaPredicted RBP eCLIP0.44□□□□□ -2.34
SCAF11-207ENST00000484275 SIP14410 1827 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TTC21AQ8NDW8 1320 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 PLB1Q6P1J6 1458 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 CAMSAP1Q5T5Y3 1602 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 ALPK3Q96L96 1907 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 PQLC2LA1A4F0 135 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TMEM212A6NML5 194 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 NIPSNAP2O75323 286 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 OR5F1O95221 314 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 HTR1AP08908 422 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 UBE2IP63279 158 aaKnown RBP0.43□□□□□ -2.34
SCAF11-207ENST00000484275 ZNF846Q147U1 533 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 SURF2Q15527 256 aaPredicted RBP0.43□□□□□ -2.34
SCAF11-207ENST00000484275 DEFB115Q30KQ5 88 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 HIST2H3PS2Q5TEC6 136 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TEX36Q5VZQ5 186 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 C8orf74Q6P047 294 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 LCN15Q6UWW0 184 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 MIR17HGQ75NE6 70 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 LINC00471Q8N535 108 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 ZNF565Q8N9K5 539 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 WFDC11Q8NEX6 87 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TOMM6Q96B49 74 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 DCUN1D1Q96GG9 259 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TSPAN32Q96QS1 320 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 REG4Q9BYZ8 158 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 MIXL1Q9H2W2 232 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TRABDQ9H4I3 376 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 FBXL12Q9NXK8 326 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 SNURFQ9Y675 71 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 TMEM56-RWDD3S4R434 201 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 MED1Q15648 1581 aaPredicted RBP0.43□□□□□ -2.34
SCAF11-207ENST00000484275 ARHGEF28Q8N1W1 1705 aaKnown RBP0.43□□□□□ -2.34
SCAF11-207ENST00000484275 SCN3AQ9NY46 2000 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 CACNA1BQ00975 2339 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 RTL1A6NKG5 1358 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 MTUS2Q5JR59 1369 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 E9PCH4 1651 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 NUP98P52948 1817 aa0.43□□□□□ -2.34
SCAF11-207ENST00000484275 PIK3C2GO75747 1445 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 TRAV9-1A0A075B6T8 112 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 TRAV14DV4A0A0A6YYC5 116 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 A0A0D9SG52 128 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 EXOC1LA0A1B0GW35 172 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 GOLGA6L19H0YKK7 550 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 C19orf84I3L1E1 186 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 GEMIN2O14893 280 aaKnown RBP0.42□□□□□ -2.34
SCAF11-207ENST00000484275 CHP2O43745 196 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 OR2B3O76000 313 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 TCL1BO95988 128 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 SERPINA6P08185 405 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 RBP1P09455 135 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 UBBP0CG47 229 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 RPL5P46777 297 aaKnown RBP0.42□□□□□ -2.34
SCAF11-207ENST00000484275 OMPP47874 163 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 CEBPGP53567 150 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 HBA1P69905 142 aa0.42□□□□□ -2.34
SCAF11-207ENST00000484275 ACOT6Q3I5F7 207 aaPredicted RBP0.42□□□□□ -2.34
SCAF11-207ENST00000484275 KHDC3LQ587J8 217 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms