RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 SMPXQ9UHP9 88 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 TMEM14DPA8MWL7 114 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 NPIPB4C9JG80 1138 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 TCF19Q9Y242 345 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 MORN3Q6PF18 240 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-207ENST00000483888 C16orf47Q6ZP98 133 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-207ENST00000483888 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
COL12A1-207ENST00000483888 NPC2P61916 151 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 PHLDA1Q8WV24 401 aaPredicted RBP8.69□□□□□ -1.02
COL12A1-207ENST00000483888 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 C9orf50Q5SZB4 431 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 IGLC2P0DOY2 106 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 IGLC3P0DOY3 106 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 PCSK4Q6UW60 755 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
COL12A1-207ENST00000483888 TRAV8-3A0A0A6YYJ7 113 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 A0A1B0GUS0 222 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 IGFBP6P24592 240 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-207ENST00000483888 CRYBA4P53673 196 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 POLEQ07864 2286 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 SLC25A20O43772 301 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 WISP3O95389 354 aaPredicted RBP8.68□□□□□ -1.02
COL12A1-207ENST00000483888 RAX2Q96IS3 184 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
COL12A1-207ENST00000483888 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 ZIC1Q15915 447 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 IGKV3D-20A0A0C4DH25 116 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 HRKO00198 91 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 ECSCRQ19T08 205 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 MCRIP2Q9BUT9 160 aaKnown RBP8.68□□□□□ -1.02
COL12A1-207ENST00000483888 SPINT1O43278 529 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 RPL27AP46776 148 aaKnown RBP8.68□□□□□ -1.02
COL12A1-207ENST00000483888 ARPC1AQ92747 370 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 HCFC1P51610 2035 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 CADP27708 2225 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 J3KT08 172 aa8.68□□□□□ -1.02
COL12A1-207ENST00000483888 DOPEY2Q9Y3R5 2298 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 VEGFBP49765 207 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 C6orf15Q6UXA7 325 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-207ENST00000483888 LINC01551Q86U37 167 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 Q9H3A6 140 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 A0A1W2PQD3 144 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 GNG5P63218 68 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 ANXA2RQ3ZCQ2 193 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 CIARTQ8N365 385 aaPredicted RBP8.67□□□□□ -1.02
COL12A1-207ENST00000483888 R4GN57 208 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 TMEM258P61165 79 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 DRAM1Q8N682 238 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 CD55P08174 381 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 LAGE3Q14657 143 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 IGHV2-26A0A0B4J1V2 119 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A10PA6NDY2 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A18PA6NE21 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A16PA6NEW6 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A20PA6NIJ5 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A8PA6NJQ4 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A7PA6NKC0 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A22PA8MWA6 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A12PA8MX19 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A5PA8MXJ8 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A23PA8MXZ1 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 NAPSAO96009 420 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A15PP0C7V4 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A13PP0C7W8 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A14PP0C7W9 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 FAM90A24PP0C7X0 464 aa8.67□□□□□ -1.02
COL12A1-207ENST00000483888 LPAL2Q16609 132 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 BVES-AS1Q5T3Y7 98 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 MDP1Q86V88 176 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 RPRMLQ8N4K4 120 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 DEPPQ9NTK1 212 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 Q6ZWC4 215 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 MRPL20Q9BYC9 149 aaKnown RBP8.66□□□□□ -1.02
COL12A1-207ENST00000483888 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 NGFRP08138 427 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 EBLN2Q6P2I7 272 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 H3BMG7 143 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 IGHV2-70DA0A0C4DH43 119 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 NCR2O95944 276 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 FBXL15Q9H469 300 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 VSIRQ9H7M9 311 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 PPIHO43447 177 aaKnown RBP8.66□□□□□ -1.02
COL12A1-207ENST00000483888 IL11P20809 199 aa8.66□□□□□ -1.02
COL12A1-207ENST00000483888 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
COL12A1-207ENST00000483888 BTAF1O14981 1849 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 Q6ZNB5 142 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 ASCL5Q7RTU5 278 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 DLL3Q9NYJ7 618 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 LOC101059948A0A1B0GTJ6 334 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 ZXDCQ2QGD7 858 aaPredicted RBP8.65□□□□□ -1.02
COL12A1-207ENST00000483888 SLC25A53Q5H9E4 307 aa8.65□□□□□ -1.02
COL12A1-207ENST00000483888 SHANK1Q9Y566 2161 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms