RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 ZNF420Q8TAQ5 688 aaPredicted RBP2.43□□□□□ -2.02
SHQ1-208ENST00000482785 TMBIM1Q969X1 311 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 TMEM106AQ96A25 262 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 PTH2Q96A98 100 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 SMIM12Q96EX1 92 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 SERPINI1Q99574 410 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 MRPL57Q9BQC6 102 aaKnown RBP2.43□□□□□ -2.02
SHQ1-208ENST00000482785 ZNF717Q9BY31 904 aaPredicted RBP2.43□□□□□ -2.02
SHQ1-208ENST00000482785 METTL9Q9H1A3 318 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 OR51B6Q9H340 312 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 HMG20AQ9NP66 347 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 PCTPQ9UKL6 214 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 PSG11Q9UQ72 335 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
SHQ1-208ENST00000482785 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 TRAV8-2A0A0B4J237 113 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PGPA6NDG6 321 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 OR6C70A6NIJ9 312 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 H3BQF6 201 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 OVOL1O14753 267 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 EIF1BO60739 113 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SMIM24O75264 130 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PDCD6O75340 191 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SPAG7O75391 227 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 MRPL33O75394 65 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 GATBO75879 557 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 RPP14O95059 124 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 IGHV3-11P01762 117 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 CD74P04233 296 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 RPS17P08708 135 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SNRPAP09012 282 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 AKR1C4P17516 323 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ME2P23368 584 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 IL3RAP26951 378 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 GRPRP30550 384 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 EIF1P41567 113 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SSR2P43308 183 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PSMD7P51665 324 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 RAP1GDS1P52306 607 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 AP2S1P53680 142 aaPredicted RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 KLF3P57682 345 aaPredicted RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ACTBP60709 375 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 NAA20P61599 178 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 RAP1AP62834 184 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 GRB2P62993 217 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PSPHP78330 225 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 HLA-DRB5Q30154 266 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 TMEM176BQ3YBM2 270 aaPredicted RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ZNF404Q494X3 552 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 Q499Y3 187 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ACTBL2Q562R1 376 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SLC16A13Q7RTY0 426 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 FAM19A5Q7Z5A7 132 aaPredicted RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 CALHM1Q8IU99 346 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 C15orf56Q8N910 161 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ZNF485Q8NCK3 441 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 OR4P4Q8NGL7 312 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 OR1L1Q8NH94 360 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 CDC26Q8NHZ8 85 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 COQ8AQ8NI60 647 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PIGXQ8TBF5 258 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 L3HYPDHQ96EM0 354 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 GGTLC1Q9BX51 225 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 MRPS26Q9BYN8 205 aaKnown RBP2.42□□□□□ -2.02
SHQ1-208ENST00000482785 TBL1XR1Q9BZK7 514 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 SLC22A4Q9H015 551 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 WFDC10AQ9H1F0 79 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 IFI27L2Q9H2X8 130 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 OR52D1Q9H346 318 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 CXorf21Q9HAI6 301 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 PLSCR3Q9NRY6 295 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 TAS2R9Q9NYW1 312 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 RNF11Q9Y3C5 154 aa2.42□□□□□ -2.02
SHQ1-208ENST00000482785 LOC389332A0A1B0GUA5 103 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 TINCRA0A1B0GVN0 87 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 A0A1B0GVX0 72 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 EXOC1LA0A1B0GW35 172 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 FAM183AA6NL82 134 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 CD300LBA8K4G0 201 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 A8MT66 165 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 BPY2O14599 106 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 AZIN1O14977 448 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 ACOX3O15254 700 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 MAGEB4O15481 346 aaPredicted RBP2.41□□□□□ -2.02
SHQ1-208ENST00000482785 SOCS1O15524 211 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 SULT1B1O43704 296 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 DHRS3O75911 302 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 IGLV2-8P01709 118 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 ISG15P05161 165 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 IFI6P09912 130 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 CTXN2P0C2S0 81 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 CPMP14384 443 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 RCVRNP35243 200 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 IFNGR2P38484 337 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 DNAJB13P59910 316 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 ERVS71-1P61550 626 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 PSG7Q13046 419 aa2.41□□□□□ -2.02
SHQ1-208ENST00000482785 C4orf26Q17RF5 130 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms