RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 UFC1Q9Y3C8 167 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 V9GYH0 126 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF785A8K8V0 405 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 MT-CO2P00403 227 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 FAUP35544 74 aaKnown RBP12.5□□□□□ -0.41
VAMP4-204ENST00000482519 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
VAMP4-204ENST00000482519 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF436Q9C0F3 470 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-204ENST00000482519 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
VAMP4-204ENST00000482519 F8W735 103 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-204ENST00000482519 I3L2K1 104 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF701M0R085 212 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-204ENST00000482519 SCAF4O95104 1147 aaKnown RBP12.49□□□□□ -0.41
VAMP4-204ENST00000482519 MFAP4P55083 255 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 AP3S2P59780 193 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 KLF9Q13886 244 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-204ENST00000482519 Q6ZRM9 215 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 NEURL2Q9BR09 285 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 ZMAT4Q9H898 229 aa12.49□□□□□ -0.41
VAMP4-204ENST00000482519 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
VAMP4-204ENST00000482519 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF207O43670 478 aaKnown RBP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 YIF1AO95070 293 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 CTSGP08311 255 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 CD7P09564 240 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 ADMP35318 185 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 SUB1P53999 127 aaKnown RBP eCLIP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF79Q15937 498 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 SPANXN2Q5MJ10 180 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 RBPMS2Q6ZRY4 209 aaKnown RBP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 TMED4Q7Z7H5 227 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 CCDC190Q86UF4 302 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM61Q8N0U2 210 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM190Q8WZ59 177 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 MARC2Q969Z3 335 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM230Q96A57 120 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 C19orf73Q9NVV2 129 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 GAR1Q9NY12 217 aaKnown RBP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 MRPL27Q9P0M9 148 aaKnown RBP12.48□□□□□ -0.41
VAMP4-204ENST00000482519 CACNG5Q9UF02 275 aa12.48□□□□□ -0.41
VAMP4-204ENST00000482519 NDUFA4O00483 81 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 GNG7O60262 68 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 NXPH3O95157 252 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 ELLP55199 621 aaPredicted RBP12.47□□□□□ -0.41
VAMP4-204ENST00000482519 TRIM63Q969Q1 353 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 ATP6V0BQ99437 205 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 DAZ1Q9NQZ3 744 aaKnown RBP12.47□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
VAMP4-204ENST00000482519 TENM3Q9P273 2699 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 A8MZ25 164 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 C8orf88P0DMB2 117 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 SPCS3P61009 180 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 RELQ04864 619 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM187Q14656 261 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 SLC16A13Q7RTY0 426 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 DUSP18Q8NEJ0 188 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 TXN2Q99757 166 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.41
VAMP4-204ENST00000482519 HEYLQ9NQ87 328 aaPredicted RBP12.46□□□□□ -0.41
VAMP4-204ENST00000482519 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 INS-IGF2F8WCM5 200 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 RNASE2P10153 161 aaKnown RBP12.45□□□□□ -0.42
VAMP4-204ENST00000482519 ANXA3P12429 323 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 INPP1P49441 399 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 STAB2Q8WWQ8 2551 aa12.45□□□□□ -0.42
VAMP4-204ENST00000482519 OPRK1P41145 380 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 NPBWR1P48145 328 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
VAMP4-204ENST00000482519 HAGHQ16775 308 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 LYZL2Q7Z4W2 148 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 OR52E5Q8NH55 327 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
VAMP4-204ENST00000482519 IGHV3-49A0A0A0MS15 119 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 C15orf62A8K5M9 175 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 CORTO00230 105 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 SULT1A3P0DMM9 295 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 SULT1A4P0DMN0 295 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 VAMP1P23763 118 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 FCGR2BP31994 310 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-204ENST00000482519 ANKRD55Q3KP44 614 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 LGI3Q8N145 548 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 IL22RA2Q969J5 263 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 SRRQ9GZT4 340 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 SRD5A3Q9H8P0 318 aa12.43□□□□□ -0.42
VAMP4-204ENST00000482519 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
VAMP4-204ENST00000482519 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
VAMP4-204ENST00000482519 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
VAMP4-204ENST00000482519 K7EMT4 169 aa12.42□□□□□ -0.42
VAMP4-204ENST00000482519 HTR2BP41595 481 aa12.42□□□□□ -0.42
VAMP4-204ENST00000482519 MLANAQ16655 118 aa12.42□□□□□ -0.42
VAMP4-204ENST00000482519 AARDQ4LEZ3 155 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms