RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 TRAPPC2BP0DI82 140 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 SMCO1Q147U7 214 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 ECSCRQ19T08 205 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 NMSQ5H8A3 153 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 C10orf55Q5SWW7 151 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 Q6ZRM9 215 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 OR4C12Q96R67 309 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 SPIN2AQ99865 258 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 SPIN2BQ9BPZ2 258 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 FAM103A1Q9BTL3 118 aaKnown RBP8.84□□□□□ -0.99
GARNL3-217ENST00000481875 ELOVL1Q9BW60 279 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 QTRT1Q9BXR0 403 aaKnown RBP8.84□□□□□ -0.99
GARNL3-217ENST00000481875 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 SIGLEC8Q9NYZ4 499 aa8.84□□□□□ -0.99
GARNL3-217ENST00000481875 RYR2Q92736 4967 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 LCE6AA0A183 80 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 C7orf66A4D0T2 115 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 DBX1A6NMT0 343 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 CCSO14618 274 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 ST8SIA3O43173 380 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 FGF2P09038 288 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 SLC25A6P12236 298 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 ZP3P21754 424 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 HSPE1P61604 102 aaKnown RBP8.83□□□□□ -1
GARNL3-217ENST00000481875 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
GARNL3-217ENST00000481875 UNQ5815/PRO19632Q6UWF5 114 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 GSG1LQ6UXU4 331 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 LFNGQ8NES3 379 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 OR5B3Q8NH48 314 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 SRSF12Q8WXF0 261 aaKnown RBP8.83□□□□□ -1
GARNL3-217ENST00000481875 MED28Q9H204 178 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 RANGRFQ9HD47 186 aaPredicted RBP8.83□□□□□ -1
GARNL3-217ENST00000481875 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 GSKIPQ9P0R6 139 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 CACFD1Q9UGQ2 172 aa8.83□□□□□ -1
GARNL3-217ENST00000481875 A0A0G2JLM5 398 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 HMX3A6NHT5 357 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 GOSR2O14653 212 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 NXPH3O95157 252 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 APELAP0DMC3 54 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 IGHV4-30-4P0DP06 118 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 SSBP2P81877 361 aaPredicted RBP8.82□□□□□ -1
GARNL3-217ENST00000481875 IAH1Q2TAA2 248 aaPredicted RBP8.82□□□□□ -1
GARNL3-217ENST00000481875 IL34Q6ZMJ4 242 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 ENY2Q9NPA8 101 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 COA4Q9NYJ1 87 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 STARD9Q9P2P6 4700 aa8.82□□□□□ -1
GARNL3-217ENST00000481875 CEBPZOSA8MTT3 80 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 MPTX1A8MV57 137 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 E7EUB6 86 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 SIX6O95475 246 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 ATF4P18848 351 aaPredicted RBP8.81□□□□□ -1
GARNL3-217ENST00000481875 TPPP2P59282 170 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 SPCS3P61009 180 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 SPINK9Q5DT21 86 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 OR5T1Q8NG75 326 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 OR10W1Q8NGF6 305 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 OR10C1Q96KK4 312 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 C2orf50Q96LR7 162 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 NDUFA4L2Q9NRX3 87 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 MGAT4CQ9UBM8 478 aa8.81□□□□□ -1
GARNL3-217ENST00000481875 CGB1A6NKQ9 187 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 PITX3O75364 302 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 MED6O75586 246 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 SCGB1D2O95969 90 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 IGHV3-11P01762 117 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 TRGV3P03979 118 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 OR13C7P0DN81 318 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 HOXA1P49639 335 aaPredicted RBP8.8□□□□□ -1
GARNL3-217ENST00000481875 ERHP84090 104 aaKnown RBP8.8□□□□□ -1
GARNL3-217ENST00000481875 PRCDQ00LT1 54 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 TNFRSF9Q07011 255 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 ZNF343Q6P1L6 599 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 ZBTB8BQ8NAP8 495 aaPredicted RBP8.8□□□□□ -1
GARNL3-217ENST00000481875 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 OR52E5Q8NH55 327 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 USMG5Q96IX5 58 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 MS4A10Q96PG2 267 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 SRSF8Q9BRL6 282 aaKnown RBP8.8□□□□□ -1
GARNL3-217ENST00000481875 PLEKHA3Q9HB20 300 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
GARNL3-217ENST00000481875 A0A1B0GW64 132 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 TEX22C9J3V5 150 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 FAM90A26D6RGX4 464 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 WRBO00258 174 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 AREGP15514 252 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 NKX2-1P43699 371 aaPredicted RBP8.79□□□□□ -1
GARNL3-217ENST00000481875 CYCSP99999 105 aaKnown RBP8.79□□□□□ -1
GARNL3-217ENST00000481875 ID3Q02535 119 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 FCN2Q15485 313 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 AARDQ4LEZ3 155 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 Q6ZNX1 250 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 HSD17B13Q7Z5P4 300 aaPredicted RBP8.79□□□□□ -1
GARNL3-217ENST00000481875 SPATA25Q9BR10 227 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 HIPK2Q9H2X6 1198 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 RBKSQ9H477 322 aa8.79□□□□□ -1
GARNL3-217ENST00000481875 HEYLQ9NQ87 328 aaPredicted RBP8.79□□□□□ -1
GARNL3-217ENST00000481875 HSPB7Q9UBY9 170 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms