RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF136P52737 540 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 FABP5Q01469 135 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 BAMBIQ13145 260 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 PACRGLQ8N7B6 248 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 ZNF581Q9P0T4 197 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 DOK5Q9P104 306 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
SMC6-208ENST00000481708 IGKV1D-43A0A0B4J1Z2 117 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 MANBAO00462 879 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 AKR1C3P42330 323 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HERVK_113P63121 156 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HIST1H3AP68431 136 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 H3F3AP84243 136 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 TMEM241Q24JQ0 296 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 DEFB133Q30KQ1 61 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 SBSNQ6UWP8 590 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 TMPPEQ6ZT21 453 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HIST2H3AQ71DI3 136 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 DEFB119Q8N690 84 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 POLR2J2Q9GZM3 115 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 POLR2J3Q9H1A7 115 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 OR52D1Q9H346 318 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 SLC25A22Q9H936 323 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 CYSLTR1Q9Y271 337 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 PPP5D1E7EU14 171 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF354AO60765 605 aaPredicted RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 SS18L1O75177 396 aaPredicted RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 OR5G3P0C626 314 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 MPC1LP0DKB6 136 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 GPX2P18283 190 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 RCVRNP35243 200 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 DIO3P55073 304 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HSPE1P61604 102 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 CADM2Q8N3J6 435 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF283Q8N7M2 679 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 TMEM158Q8WZ71 300 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 FOPNLQ96NB1 174 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 TIMM17AQ99595 171 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 PYGO2Q9BRQ0 406 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 SLC25A2Q9BXI2 301 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 ASF1BQ9NVP2 202 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 DPM3Q9P2X0 92 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 OR52A1Q9UKL2 312 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF780BQ9Y6R6 833 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF407Q9C0G0 2248 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 STAB1Q9NY15 2570 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 IGHV3-72A0A0B4J1Y9 119 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 PGPA6NDG6 321 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ZNF98A6NK75 572 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 CLDN25C9JDP6 229 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 M0QYV0 167 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 MRASO14807 208 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HSPB1P04792 205 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 MRPL3P09001 348 aaKnown RBP2.28□□□□□ -2.04
SMC6-208ENST00000481708 MP68P56378 58 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 DHRS2Q13268 280 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 KCNJ8Q15842 424 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 EBLN2Q6P2I7 272 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 C18orf65Q6ZTR6 163 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 KRTCAP2Q8N6L1 136 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 HEXA-AS1Q9H8Q6 139 aa2.28□□□□□ -2.04
SMC6-208ENST00000481708 ESPL1Q14674 2120 aa2.28□□□□□ -2.05
SMC6-208ENST00000481708 PKDREJQ9NTG1 2253 aa2.28□□□□□ -2.05
SMC6-208ENST00000481708 A0A0J9YY10 115 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 A0A0U1RQV1 116 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 A0A1B0GX78 115 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 OR5H1A6NKK0 313 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 M0R381 172 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 ORC5O43913 435 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 TLX1NBP0CAT3 122 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 T-ENOLP0DO92 83 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 APLNRP35414 380 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 LTC4SQ16873 150 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 TMEM128Q5BJH2 165 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 C2orf66Q6UXQ4 117 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 C15orf56Q8N910 161 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 JOSD2Q8TAC2 188 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 LHFPL5Q8TAF8 219 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 NMNAT1Q9HAN9 279 aaPredicted RBP2.27□□□□□ -2.05
SMC6-208ENST00000481708 ZNF492Q9P255 531 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 INTS1Q8N201 2190 aaKnown RBP2.27□□□□□ -2.05
SMC6-208ENST00000481708 ZNF682O95780 498 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 SEC11BP0C7V7 166 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 MYL12AP19105 171 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 LAIR2Q6ISS4 152 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 UGT2A3Q6UWM9 527 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 LINC00596Q86U02 117 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 C1orf174Q8IYL3 243 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 CCDC90BQ9GZT6 254 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 HES4Q9HCC6 221 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 ZNF331Q9NQX6 463 aaPredicted RBP2.27□□□□□ -2.05
SMC6-208ENST00000481708 CHCHD2Q9Y6H1 151 aaPredicted RBP2.27□□□□□ -2.05
SMC6-208ENST00000481708 PXMP4Q9Y6I8 212 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 GTF3C1Q12789 2109 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 MED13Q9UHV7 2174 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 A8MUN3 132 aa2.27□□□□□ -2.05
SMC6-208ENST00000481708 OR2J2O76002 312 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms