RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SMIM4Q8WVI0 70 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 CACNG8Q8WXS5 425 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 MISP3Q96FF7 219 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 OR10C1Q96KK4 312 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 C20orf24Q9BUV8 137 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 HIPK2Q9H2X6 1198 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 SCP2D1Q9UJQ7 156 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
CCM2-213ENST00000480658 KIR2DL5BA0A0G2JN68 375 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 KIR2DL5BA0A0G2JPC4 375 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 RPS10-NUDT3A0A1W2PQS6 291 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 SCAF4O95104 1147 aaKnown RBP8.59□□□□□ -1.03
CCM2-213ENST00000480658 UCP1P25874 307 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 FAUP35544 74 aaKnown RBP8.59□□□□□ -1.03
CCM2-213ENST00000480658 ALDH3B2P48448 385 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 HOXA1P49639 335 aaPredicted RBP8.59□□□□□ -1.03
CCM2-213ENST00000480658 PPP5CP53041 499 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 IL18Q14116 193 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 KIR2DL5AQ8N109 375 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 TMEM217Q8N7C4 229 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 OR52E5Q8NH55 327 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 DEDD2Q8WXF8 326 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 NARS2Q96I59 477 aaKnown RBP8.59□□□□□ -1.03
CCM2-213ENST00000480658 NXF2Q9GZY0 626 aaKnown RBP8.59□□□□□ -1.03
CCM2-213ENST00000480658 KCNIP3Q9Y2W7 256 aa8.59□□□□□ -1.03
CCM2-213ENST00000480658 TRAV30A0A087WSZ9 112 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 TRAV14DV4A0A0A6YYC5 116 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 TEX13DA0A0J9YY54 714 aaPredicted RBP8.58□□□□□ -1.04
CCM2-213ENST00000480658 A0A1W2PS18 150 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 I3L2K1 104 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 JTBO76095 146 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 YIF1AO95070 293 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 MT-CO2P00403 227 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 CTSGP08311 255 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 ANXA3P12429 323 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 AP3S2P59780 193 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 SRPXP78539 464 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 Q6ZWC4 215 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 TMEM116Q8NCL8 245 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 OR13C8Q8NGS7 320 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 RBPMSQ93062 196 aaKnown RBP8.58□□□□□ -1.04
CCM2-213ENST00000480658 PINX1Q96BK5 328 aaKnown RBP8.58□□□□□ -1.04
CCM2-213ENST00000480658 DIRAS2Q96HU8 199 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 NAA50Q9GZZ1 169 aaKnown RBP8.58□□□□□ -1.04
CCM2-213ENST00000480658 TMEM222Q9H0R3 208 aa8.58□□□□□ -1.04
CCM2-213ENST00000480658 IGHV7-4-1A0A0J9YVY3 117 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 RBMY1BA6NDE4 496 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 RBMY1EA6NEQ0 496 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 CDS2O95674 445 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 IGKV1-39P01597 117 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 IGKV1D-39P04432 117 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 RBMY1DP0C7P1 496 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 HTR2BP41595 481 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 RPL5P46777 297 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 EIF2B2P49770 351 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 MFAP2P55001 183 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 SPCS3P61009 180 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 AARDQ4LEZ3 155 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 RNASE12Q5GAN4 147 aaKnown RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 ETFRF1Q6IPR1 90 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 ZNF600Q6ZNG1 722 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 CLVS1Q8IUQ0 354 aaPredicted RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 STPG3Q8N7X2 389 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 IL22RA2Q969J5 263 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 GALNT14Q96FL9 552 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 TP53RKQ96S44 253 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 CHRDL1Q9BU40 450 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 NAA60Q9H7X0 242 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
CCM2-213ENST00000480658 SMPXQ9UHP9 88 aa8.57□□□□□ -1.04
CCM2-213ENST00000480658 TRAV2A0A0B4J234 112 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
CCM2-213ENST00000480658 ST8SIA3O43173 380 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 GSTZ1O43708 216 aaPredicted RBP8.56□□□□□ -1.04
CCM2-213ENST00000480658 IGKV1-5P01602 117 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 P0C879 139 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
CCM2-213ENST00000480658 ADMP35318 185 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 OPRK1P41145 380 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 ATP5IP56385 69 aaPredicted RBP8.56□□□□□ -1.04
CCM2-213ENST00000480658 WFDC3Q8IUB2 231 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 RNASEH2CQ8TDP1 164 aaKnown RBP8.56□□□□□ -1.04
CCM2-213ENST00000480658 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
CCM2-213ENST00000480658 A0A0B4J293 547 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 DFFBO76075 338 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 SLC25A4P12235 298 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 PI3P19957 117 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 NUP62P37198 522 aaPredicted RBP8.55□□□□□ -1.04
CCM2-213ENST00000480658 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 MARCH1Q8TCQ1 289 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 DYNC2LI1Q8TCX1 351 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 GRAMD2BQ96HH9 432 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 METTL26Q96S19 204 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 PFDN2Q9UHV9 154 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 NBEAL2Q6ZNJ1 2754 aa8.55□□□□□ -1.04
CCM2-213ENST00000480658 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms