RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CIB2O75838 187 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 KBTBD11O94819 623 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 CDK1P06493 297 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 RRASP10301 218 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 RPA2P15927 270 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 GNB3P16520 340 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 PSMB6P28072 239 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 GPR183P32249 361 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 APOC4P55056 127 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 TAS2R43P59537 309 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 FAM106AQ4KMX7 169 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 HSD17B12Q53GQ0 312 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 GLT8D1Q68CQ7 371 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 ZFP1Q6P2D0 407 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF773Q6PK81 442 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 PQLC2Q6ZP29 291 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 AHSA2Q719I0 299 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 KIR2DL5AQ8N109 375 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 OR5B3Q8NH48 314 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 KIR2DL5BQ8NHK3 375 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 TMEM167AQ8TBQ9 72 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 CYGBQ8WWM9 190 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 TMEM190Q8WZ59 177 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 THRSPQ92748 146 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 TMEM203Q969S6 136 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 FAM3DQ96BQ1 224 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 CHRDL1Q9BU40 450 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 SCRT1Q9BWW7 348 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF436Q9C0F3 470 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 OR51E2Q9H255 320 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 C5orf66Q9H5L9 145 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 SMPD3Q9NY59 655 aaPredicted RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 MRPL27Q9P0M9 148 aaKnown RBP3.31□□□□□ -1.88
CKS1B-207ENST00000477676 MBD2Q9UBB5 411 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 MGAT4AQ9UM21 535 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 PRELID1Q9Y255 219 aa3.31□□□□□ -1.88
CKS1B-207ENST00000477676 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 IRGMA1A4Y4 181 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 BUB3O43684 328 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 ATP5HO75947 161 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 DIRAS3O95661 229 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 HLA-DQB1P01920 261 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 CTSDP07339 412 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RBMY1A1P0DJD3 496 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 PTHLHP12272 177 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 GALP22466 123 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 NFYAP23511 347 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 SERPINB10P48595 397 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 OR10A3P58181 314 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 OR2B8PP59922 312 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 MED21Q13503 144 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RBMY1FQ15415 496 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RAB11BQ15907 218 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 ANKRD55Q3KP44 614 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 HES5Q5TA89 166 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 LIPKQ5VXJ0 399 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 Q6ZS49 121 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 SSX9Q7RTT3 188 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 SLC25A42Q86VD7 318 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 MS4A15Q8N5U1 240 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 FAM24BQ8N5W8 94 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 GVQW1Q8N7I0 195 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 Q8NAQ8 132 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 OR10W1Q8NGF6 305 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 OR11H2Q8NH07 326 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 C11orf45Q8TAV5 145 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 CD300LFQ8TDQ1 290 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 EEF1AKMT3Q96AZ1 226 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 GALNT14Q96FL9 552 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 ADTRPQ96IZ2 230 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 OR2A7Q96R45 310 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RNF2Q99496 336 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 SPAG8Q99932 426 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 URM1Q9BTM9 101 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 C11orf68Q9H3H3 251 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 PLCXD1Q9NUJ7 323 aa3.3□□□□□ -1.88
CKS1B-207ENST00000477676 RBMX2Q9Y388 322 aaKnown RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
CKS1B-207ENST00000477676 A0A075B6Q4 140 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 TRBV7-1A0A0A6YYK4 115 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 OR2T8A6NH00 312 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 IGLL5B9A064 214 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 H0Y8G0 127 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 MYL12BO14950 172 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 TGOLN2O43493 480 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 XRCC3O43542 346 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 DENRO43583 198 aaKnown RBP3.29□□□□□ -1.88
CKS1B-207ENST00000477676 SSX5O60225 188 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 CIDEAO60543 219 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 HIST1H1DP16402 221 aaKnown RBP3.29□□□□□ -1.88
CKS1B-207ENST00000477676 HLA-GP17693 338 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 ARPC4P59998 168 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 FABP5Q01469 135 aa3.29□□□□□ -1.88
CKS1B-207ENST00000477676 TPBGQ13641 420 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms