RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 FAM90A26D6RGX4 464 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 E5RGE8 158 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 L7N2F9 121 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 WRBO00258 174 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 OVOL1O14753 267 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 ARPC5O15511 151 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
HDAC6-221ENST00000477561 ACTL6BO94805 426 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 KRASP01116 189 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 IGKV1-5P01602 117 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MBPP02686 304 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-221ENST00000477561 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
HDAC6-221ENST00000477561 LYL1P12980 280 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MYOD1P15172 320 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 G6PCP35575 357 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 OR2F1Q13607 317 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 RAB32Q13637 225 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MMD2Q8IY49 270 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 PRR25Q96S07 402 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MFFQ9GZY8 342 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-221ENST00000477561 MBD2Q9UBB5 411 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 CACNG5Q9UF02 275 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 NSG2Q9Y328 171 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 LSM5Q9Y4Y9 91 aaKnown RBP6.38□□□□□ -1.39
HDAC6-221ENST00000477561 HSPB11Q9Y547 144 aa6.38□□□□□ -1.39
HDAC6-221ENST00000477561 A0A0G2JRQ6 117 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 E7EUB6 86 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 K7EPK0 472 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 PITX3O75364 302 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 SAP30O75446 220 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 MED6O75586 246 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 DEDDO75618 318 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 KBTBD11O94819 623 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 LY86O95711 162 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 OR9G9P0C7N8 305 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 P0C879 139 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 VAMP2P63027 116 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 ID3Q02535 119 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 ZNF345Q14585 488 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 C19orf35Q6ZS72 473 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 ACOT7LQ6ZUV0 252 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 OR4A16Q8NH70 328 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 VSTM2AQ8TAG5 236 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 TMEM68Q96MH6 324 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 TNFSF18Q9UNG2 199 aa6.37□□□□□ -1.39
HDAC6-221ENST00000477561 TRAV3A0A0B4J244 114 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 A0A0G2JLM5 398 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 H0YIZ8 118 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 H3BUA1 57 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 TRBV12-3P01733 135 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 IL6RP08887 468 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-221ENST00000477561 RPL27AP46776 148 aaKnown RBP6.36□□□□□ -1.39
HDAC6-221ENST00000477561 P2RY1P47900 373 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 LGALSLQ3ZCW2 172 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-221ENST00000477561 LAMTOR1Q6IAA8 161 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 OR4A47Q6IF82 309 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 HAPLN4Q86UW8 402 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 PUSL1Q8N0Z8 303 aaKnown RBP6.36□□□□□ -1.39
HDAC6-221ENST00000477561 OR4A5Q8NH83 315 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 TMEM167AQ8TBQ9 72 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 AQP10Q96PS8 301 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 RAB40CQ96S21 281 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 RNF126Q9BV68 326 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 ZC4H2Q9NQZ6 224 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 TMEM140Q9NV12 185 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 OR5AC2Q9NZP5 309 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 PRNDQ9UKY0 176 aa6.36□□□□□ -1.39
HDAC6-221ENST00000477561 RCL1Q9Y2P8 373 aaKnown RBP6.36□□□□□ -1.39
HDAC6-221ENST00000477561 A0A1B0GW64 132 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 KANTRA0A1W2PQU2 76 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 TEX22C9J3V5 150 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 SYNGR2O43760 224 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 SSSCA1O60232 199 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 OR2J3O76001 311 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 REG1AP05451 166 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 AREGP15514 252 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 CXCL2P19875 107 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 S100A11P31949 105 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 TAS2R30P59541 319 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 POLR2GP62487 172 aaKnown RBP eCLIP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 RPL8P62917 257 aaKnown RBP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 RHOGP84095 191 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 ATP5G2Q06055 141 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 OPCMLQ14982 345 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 ACSM6Q6P461 480 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 Q6ZRM9 215 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 TMUB2Q71RG4 321 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 KCNRGQ8N5I3 272 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 TTC9CQ8N5M4 171 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 OR52E5Q8NH55 327 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 CIB3Q96Q77 187 aaPredicted RBP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 SLC25A31Q9H0C2 315 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 ARL6Q9H0F7 186 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 FKBP11Q9NYL4 201 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 BET1LQ9NYM9 111 aa6.35□□□□□ -1.39
HDAC6-221ENST00000477561 PEF1Q9UBV8 284 aaKnown RBP6.35□□□□□ -1.39
HDAC6-221ENST00000477561 HSPB7Q9UBY9 170 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms