RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ENY2Q9NPA8 101 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 GAR1Q9NY12 217 aaKnown RBP12.24□□□□□ -0.45
COL1A1-205ENST00000476387 UFC1Q9Y3C8 167 aa12.24□□□□□ -0.45
COL1A1-205ENST00000476387 TMEM213A2RRL7 107 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 EDN2P20800 178 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 CBLN1P23435 193 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 KLF9Q13886 244 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-205ENST00000476387 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 CCDC190Q86UF4 302 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 GLYATL2Q8WU03 294 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 CACNG8Q8WXS5 425 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 ZNF436Q9C0F3 470 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-205ENST00000476387 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
COL1A1-205ENST00000476387 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 ELLP55199 621 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-205ENST00000476387 ZNF79Q15937 498 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 GUCA2BQ16661 112 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 DEFB114Q30KQ6 69 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 UNQ9165/PRO28630Q6UXU0 137 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 SELENOHQ8IZQ5 122 aaKnown RBP12.22□□□□□ -0.45
COL1A1-205ENST00000476387 LHFPL5Q8TAF8 219 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 MARC2Q969Z3 335 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 PINX1Q96BK5 328 aaKnown RBP12.22□□□□□ -0.45
COL1A1-205ENST00000476387 TUBA4BQ9H853 241 aa12.22□□□□□ -0.45
COL1A1-205ENST00000476387 INS-IGF2F8WCM5 200 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 MT-CO2P00403 227 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 ANXA3P12429 323 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 AKR1C4P17516 323 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 ETV6P41212 452 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 SUB1P53999 127 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL1A1-205ENST00000476387 MFAP4P55083 255 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 CD81P60033 236 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 HAGHQ16775 308 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 TM4SF20Q53R12 229 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 ZNF57Q68EA5 555 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-205ENST00000476387 UXS1Q8NBZ7 420 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 GALNT14Q96FL9 552 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 EDA2RQ9HAV5 297 aa12.21□□□□□ -0.45
COL1A1-205ENST00000476387 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-205ENST00000476387 TENM2Q9NT68 2774 aa12.21□□□□□ -0.46
COL1A1-205ENST00000476387 I3L2K1 104 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 CORTO00230 105 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 NDUFA4O00483 81 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 NUPL2O15504 423 aaKnown RBP12.2□□□□□ -0.46
COL1A1-205ENST00000476387 INPP1P49441 399 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-205ENST00000476387 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 WDR89Q96FK6 387 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-205ENST00000476387 TXN2Q99757 166 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 CHRDL1Q9BU40 450 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 C20orf24Q9BUV8 137 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 DAZ1Q9NQZ3 744 aaKnown RBP12.2□□□□□ -0.46
COL1A1-205ENST00000476387 MRPL27Q9P0M9 148 aaKnown RBP12.2□□□□□ -0.46
COL1A1-205ENST00000476387 CACNG5Q9UF02 275 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
COL1A1-205ENST00000476387 F8W735 103 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-205ENST00000476387 GNG7O60262 68 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 SPCS3P61009 180 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 SRPXP78539 464 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 TMEM187Q14656 261 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 Q6ZRM9 215 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 GPR146Q96CH1 333 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 NDUFA13Q9P0J0 144 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 MLXQ9UH92 298 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
COL1A1-205ENST00000476387 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 ZNF785A8K8V0 405 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 IGHV3-48P01763 117 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 RNASE2P10153 161 aaKnown RBP12.18□□□□□ -0.46
COL1A1-205ENST00000476387 FCGR2BP31994 310 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-205ENST00000476387 ADMP35318 185 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 AARDQ4LEZ3 155 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
COL1A1-205ENST00000476387 SLC16A13Q7RTY0 426 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 OR52E5Q8NH55 327 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 SRRQ9GZT4 340 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 HEYLQ9NQ87 328 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-205ENST00000476387 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 CACFD1Q9UGQ2 172 aa12.18□□□□□ -0.46
COL1A1-205ENST00000476387 CEBPZOSA8MTT3 80 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 CTSGP08311 255 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 SULT1A3P0DMM9 295 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 SULT1A4P0DMN0 295 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 NPBWR1P48145 328 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-205ENST00000476387 LGI3Q8N145 548 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 DUSP18Q8NEJ0 188 aa12.17□□□□□ -0.46
COL1A1-205ENST00000476387 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-205ENST00000476387 DYNC2H1Q8NCM8 4307 aaKnown RBP12.17□□□□□ -0.46
COL1A1-205ENST00000476387 CSMD3Q7Z407 3707 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms