RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 TPPP2P59282 170 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 RNPS1Q15287 305 aaKnown RBP4.14□□□□□ -1.75
CCDC39-204ENST00000476379 MMDQ15546 238 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 Q6ZR03 302 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 ZADH2Q8N4Q0 377 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 SARAFQ96BY9 339 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 WDR54Q9H977 334 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 LRP4O75096 1905 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 C10orf142B7Z368 130 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 KBTBD11O94819 623 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 CCL1P22362 96 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 TNFSF10P50591 281 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 B3GALT5-AS1P59052 145 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 RPL8P62917 257 aaKnown RBP4.14□□□□□ -1.75
CCDC39-204ENST00000476379 LRRC75BQ2VPJ9 315 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 ARSJQ5FYB0 599 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-204ENST00000476379 TEPPQ6URK8 271 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 PCSK4Q6UW60 755 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 MMD2Q8IY49 270 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 OR8G5Q8NG78 346 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 WFDC12Q8WWY7 111 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 C1QTNF5Q9BXJ0 243 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 LINC00527Q9UJ94 153 aa4.14□□□□□ -1.75
CCDC39-204ENST00000476379 F11RQ9Y624 299 aaKnown RBP4.14□□□□□ -1.75
CCDC39-204ENST00000476379 HRNRQ86YZ3 2850 aaPredicted RBP4.14□□□□□ -1.75
CCDC39-204ENST00000476379 MKRN2OSH3BPM6 223 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 M0R143 59 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 MLNRO43193 412 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 NDUFA2O43678 99 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 RPL19P84098 196 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 DIAPH2-AS1Q14236 149 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 RTL8BQ17RB0 113 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 RPEL1Q2QD12 228 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 TEX38Q6PEX7 206 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 BHLHA15Q7RTS1 189 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 ZNF645Q8N7E2 425 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 LINC01560Q8TB33 94 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 NRGNQ92686 78 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 NEUROG1Q92886 237 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SFRP2Q96HF1 295 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 KLK15Q9H2R5 256 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CALYQ9NYX4 217 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 HCFC1P51610 2035 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 PGPA6NDG6 321 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 IFITM10A6NMD0 228 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SIAH2O43255 324 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 MMP23AO75900 390 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 ERHP84090 104 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 GABRA6Q16445 453 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 GFRALQ6UXV0 394 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 KCNS1Q96KK3 526 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 C18orf15Q96N68 181 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CITED2Q99967 270 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 NABP2Q9BQ15 211 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 PRDM14Q9GZV8 571 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CXXC4Q9H2H0 198 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 DMRT1Q9Y5R6 373 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 B4E171 279 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 GATCO43716 136 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 IL6RP08887 468 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 HIST1H1BP16401 226 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 TSPAN7P41732 249 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 COMPP49747 757 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 RHOBP62745 196 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 IBA57Q5T440 356 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CRIP3Q6Q6R5 217 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 DNM1P46Q6ZS02 220 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 COQ2Q96H96 371 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 OR6C3Q9NZP0 311 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 TBL2Q9Y4P3 447 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SAA2-SAA4A0A096LPE2 208 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 ZNF729A6NN14 1252 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 ZNF883P0CG24 379 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SAA2P0DJI9 122 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 PPOXP50336 477 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 ARF6P62330 175 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 PNRC1Q12796 327 aaPredicted RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 OR4A47Q6IF82 309 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 WDR82Q6UXN9 313 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 LYPD6Q86Y78 171 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CD177Q8N6Q3 437 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 OIT3Q8WWZ8 545 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 OR8B2Q96RD0 313 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 SH2D2AQ9NP31 389 aa4.13□□□□□ -1.75
CCDC39-204ENST00000476379 CISD1Q9NZ45 108 aaKnown RBP4.13□□□□□ -1.75
CCDC39-204ENST00000476379 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 HPRT1P00492 218 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 TRA2AQ13595 282 aaKnown RBP eCLIP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM56Q96MV1 263 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 YTHDF2Q9Y5A9 579 aaKnown RBP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM56-RWDD3S4R434 201 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 PCSK5Q92824 1860 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 SPRY2O43597 315 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 HTR1DP28221 377 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 GFRA1P56159 465 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms