RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GLYATQ6IB77 296 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 FAHD1Q6P587 224 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ZCCHC23Q6ZST2 131 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 Q6ZT83 130 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 OLIG3Q7RTU3 272 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 RIBC1Q8N443 379 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF738Q8NE65 137 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 OR8J2Q8NGG1 315 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 OR5D16Q8NGK9 328 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 OR5AK3PQ8NH89 298 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 APOBEC3DQ96AK3 386 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 UBE2WQ96B02 151 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 MUCL1Q96DR8 90 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 TRNT1Q96Q11 434 aaKnown RBP2.11□□□□□ -2.07
PTCD3-211ENST00000476215 CIB1Q99828 191 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 HIGD2AQ9BW72 106 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 REG4Q9BYZ8 158 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 DPY30Q9C005 99 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 C20orf27Q9GZN8 174 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 DIABLOQ9NR28 239 aa2.11□□□□□ -2.07
PTCD3-211ENST00000476215 HEATR5AQ86XA9 2040 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.1□□□□□ -2.072e-7■■■■■ 41.7
PTCD3-211ENST00000476215 UQCRHLA0A096LP55 91 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TMED7-TICAM2A0A0A6YYA0 188 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 GOLGA8QA0A0J9YX86 632 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 HMGN4O00479 90 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 GPR171O14626 319 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 MRPL33O75394 65 aaKnown RBP2.1□□□□□ -2.07
PTCD3-211ENST00000476215 LYZL6O75951 148 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CDS2O95674 445 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 C1QCP02747 245 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 SERPINE1P05121 402 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CTSGP08311 255 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CGB3P0DN86 165 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CGB7P0DN87 165 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 S100A3P33764 101 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 RANBP1P43487 201 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 OR2B6P58173 313 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 H3F3AP84243 136 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 BSPH1Q075Z2 132 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 DHRS2Q13268 280 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 STX3Q13277 289 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TPBGQ13641 420 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CLEC12BQ2HXU8 276 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TNFAIP8L3Q5GJ75 292 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TIMM23BQ5SRD1 257 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 SSX8Q7RTT4 187 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 FAM19A1Q7Z5A9 133 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 LYPD6Q86Y78 171 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 LRRC34Q8IZ02 419 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CLECL1Q8IZS7 167 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 ZIC4Q8N9L1 334 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 RAB8BQ92930 207 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TESCQ96BS2 214 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 ROPN1LQ96C74 230 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 ARL5BQ96KC2 179 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 SLC35G5Q96KT7 338 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TEX37Q96LM6 180 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 CCDC115Q96NT0 180 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 OR52E6Q96RD3 313 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 LINC01587Q99440 93 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 DHRS9Q9BPW9 319 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 C1QTNF6Q9BXI9 259 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 POTEKPQ9BYX7 375 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 SLC25A31Q9H0C2 315 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 OR51I1Q9H343 314 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 NAGKQ9UJ70 344 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 SLC35A3Q9Y2D2 325 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 NOSIPQ9Y314 301 aaKnown RBP2.1□□□□□ -2.07
PTCD3-211ENST00000476215 HDGFL3Q9Y3E1 203 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
PTCD3-211ENST00000476215 HEATR1Q9H583 2144 aaKnown RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 A0A1B0GXF2 115 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 A6NED7 52 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 CLDN24A6NM45 220 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 TRPC5OSA6NMA1 111 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 H3BP45 60 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 FAAHO00519 579 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 KRT75O95678 551 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 IL6P05231 212 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 DBIP07108 87 aaKnown RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 TFPTP0C1Z6 253 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 RPS4Y1P22090 263 aaKnown RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 S100A2P29034 98 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 CDKN2CP42773 168 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 LGALS7P47929 136 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 POLR2HP52434 150 aaKnown RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 RAB25P57735 213 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 GNA13Q14344 377 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 NXNL2Q5VZ03 156 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 C3orf33Q6P1S2 294 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 TNFAIP8L2Q6P589 184 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-211ENST00000476215 GRINAQ7Z429 371 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 LYZL2Q7Z4W2 148 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 CROCCP2Q86T23 111 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 TRIML2Q8N7C3 387 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 OR8G5Q8NG78 346 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 OR52E4Q8NGH9 312 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 ZNF563Q8TA94 476 aa2.09□□□□□ -2.07
PTCD3-211ENST00000476215 PIGXQ8TBF5 258 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms