RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TPRX1Q8N7U7 411 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 TET1Q8NFU7 2136 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 IGKV3-7A0A075B6H7 116 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV3OR16-12A0A075B7B8 117 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 CD5LO43866 347 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 SAA1P0DJI8 122 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 FGF8P55075 233 aaPredicted RBP3.82□□□□□ -1.8
CCNL1-215ENST00000474539 VAMP3Q15836 100 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 NRTNQ99748 197 aa3.82□□□□□ -1.8
CCNL1-215ENST00000474539 MED19A0JLT2 244 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 NDUFA4O00483 81 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 CLPSP04118 112 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 NBEAP1P0C6P0 100 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 WNT5AP41221 380 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 RPL36AP83881 106 aaKnown RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 LTBP2Q14767 1821 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 JOSD1Q15040 202 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 GON4LQ3T8J9 2241 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 RPL36ALQ969Q0 106 aaKnown RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 TRIOBPQ9H2D6 2365 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 OR5AC2Q9NZP5 309 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 PSCAO43653 123 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 IGHV2-5P01817 119 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 DRAXINQ8NBI3 349 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 OR4D5Q8NGN0 318 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 OR9G4Q8NGQ1 327 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 C10orf105Q8TEF2 133 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 PMCHL2Q9BQD1 86 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 TMA7Q9Y2S6 64 aaKnown RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 CLDN16Q9Y5I7 305 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 TICRRQ7Z2Z1 1910 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 A0A1W2PRE2 83 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM218A2RU14 115 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 UBE2CO00762 179 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 CELA3BP08861 270 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 DUTP33316 252 aaKnown RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
CCNL1-215ENST00000474539 ADORA2A-AS1P86434 159 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 ASCL4Q6XD76 172 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 LINC00305Q7Z4B0 112 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 LDLRAD3Q86YD5 345 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF525Q8N782 197 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 WFDC12Q8WWY7 111 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 SMIM12Q96EX1 92 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 AICDAQ9GZX7 198 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 UNC13CQ8NB66 2214 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 NLRC5Q86WI3 1866 aa3.81□□□□□ -1.8
CCNL1-215ENST00000474539 A0A1W2PRX2 142 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 NPIPB5A8MRT5 1133 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 APCSP02743 223 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RCC1P18754 421 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 CKS2P33552 79 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 SAA4P35542 130 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 YPEL3P61236 119 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 TMEM249Q2WGJ8 235 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 IBA57Q5T440 356 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 OTPQ5XKR4 325 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 LCNL1Q6ZST4 164 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 TCF23Q7RTU1 214 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 EAF1Q96JC9 268 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 F11RQ9Y624 299 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 CLPSL1A2RUU4 121 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RBMY1BA6NDE4 496 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RBMY1EA6NEQ0 496 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 LYPD3O95274 346 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 TOMM40O96008 361 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RBMY1DP0C7P1 496 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RBMY1A1P0DJD3 496 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RBMY1CP0DJD4 496 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 CEBPDP49716 269 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 C21orf62-AS1Q17RA5 79 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 MST1LQ2TV78 715 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RELL2Q8NC24 303 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 SPXQ9BT56 116 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 EDA2RQ9HAV5 297 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 FLVCR2Q9UPI3 526 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 CXorf65A6NEN9 183 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RAMP1O60894 148 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 DKK1O94907 266 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 NTF3P20783 257 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 MALP21145 153 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 ATP6V0CP27449 155 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 TCTAP57738 103 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 ZNF818PQ6ZRF7 136 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 AMELYQ99218 206 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RTN4RQ9BZR6 473 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 PAGE4O60829 102 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 SCGB1C2P0DMR2 95 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 FOXL2P58012 376 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 MEF2BQ02080 365 aaPredicted RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 FAM219BQ5XKK7 198 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 RNASEKQ6P5S7 137 aaKnown RBP3.8□□□□□ -1.8
CCNL1-215ENST00000474539 SCGB1D4Q6XE38 83 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 OR5AN1Q8NGI8 311 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 MBD6Q96DN6 1003 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
CCNL1-215ENST00000474539 FAM215AQ9Y5M1 114 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms