RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 C5orf66Q9H5L9 145 aa14.86□□□□□ -0.03
TMEM54-204ENST00000474144 CCDC59Q9P031 241 aaKnown RBP14.86□□□□□ -0.03
TMEM54-204ENST00000474144 ST8SIA3O43173 380 aa14.85□□□□□ -0.03
TMEM54-204ENST00000474144 TMBIM6P55061 237 aa14.85□□□□□ -0.03
TMEM54-204ENST00000474144 MRPS10P82664 201 aaKnown RBP14.85□□□□□ -0.03
TMEM54-204ENST00000474144 ERHP84090 104 aaKnown RBP14.85□□□□□ -0.03
TMEM54-204ENST00000474144 SSBP1Q04837 148 aaKnown RBP14.85□□□□□ -0.03
TMEM54-204ENST00000474144 CCDC71LQ8N9Z2 235 aa14.85□□□□□ -0.03
TMEM54-204ENST00000474144 GAR1Q9NY12 217 aaKnown RBP14.85□□□□□ -0.03
TMEM54-204ENST00000474144 CTDSPLO15194 276 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 UCP1P25874 307 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 ETV6P41212 452 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 MFAP4P55083 255 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 ANKRD55Q3KP44 614 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 OR4C16Q8NGL9 310 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 C6orf62Q9GZU0 229 aaPredicted RBP14.84□□□□□ -0.03
TMEM54-204ENST00000474144 UBQLN2Q9UHD9 624 aa14.84□□□□□ -0.03
TMEM54-204ENST00000474144 H3BMQ9 156 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 K7EMT4 169 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 IFNA17P01571 189 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 OR5AC1P0C628 307 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 MEF2DQ14814 521 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 Q6ZRM9 215 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 SLC35G3Q8N808 338 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 LHFPL5Q8TAF8 219 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 SPAG8Q99932 426 aaPredicted RBP14.83□□□□□ -0.04
TMEM54-204ENST00000474144 BCL7BQ9BQE9 202 aa14.83□□□□□ -0.04
TMEM54-204ENST00000474144 SLIRPQ9GZT3 109 aaKnown RBP14.83□□□□□ -0.04
TMEM54-204ENST00000474144 IGHV3-49A0A0A0MS15 119 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 C15orf62A8K5M9 175 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 DISC1C4P0D8 188 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 TSPAN4O14817 238 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 NUPL2O15504 423 aaKnown RBP14.82□□□□□ -0.04
TMEM54-204ENST00000474144 YIF1AO95070 293 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 FCGR2BP31994 310 aaPredicted RBP14.82□□□□□ -0.04
TMEM54-204ENST00000474144 RPL5P46777 297 aaKnown RBP14.82□□□□□ -0.04
TMEM54-204ENST00000474144 TXN2Q99757 166 aa14.82□□□□□ -0.04
TMEM54-204ENST00000474144 NXF2Q9GZY0 626 aaKnown RBP14.82□□□□□ -0.04
TMEM54-204ENST00000474144 ATG12O94817 140 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 AKAIN1P0CW23 69 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 RELQ04864 619 aaPredicted RBP14.81□□□□□ -0.04
TMEM54-204ENST00000474144 OR51S1Q8NGJ8 323 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 GLYATL2Q8WU03 294 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 RNF2Q99496 336 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 GGTLC1Q9BX51 225 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 TMEM222Q9H0R3 208 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 NAA60Q9H7X0 242 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 SMPXQ9UHP9 88 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 GPR132Q9UNW8 380 aa14.81□□□□□ -0.04
TMEM54-204ENST00000474144 C14orf166Q9Y224 244 aaKnown RBP14.81□□□□□ -0.04
TMEM54-204ENST00000474144 LOC102724200A0A096LPH7 203 aaPredicted RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 IGHV7-4-1A0A0J9YVY3 117 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 TEX13DA0A0J9YY54 714 aaPredicted RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 ANKRD20A5PA0PJZ0 165 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 INS-IGF2F8WCM5 200 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 CHEK1O14757 476 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 GNG7O60262 68 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 CDS2O95674 445 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 RNASE2P10153 161 aaKnown RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 SNCAP37840 140 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 PVRIGQ6DKI7 326 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 LAMTOR1Q6IAA8 161 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 SELENOHQ8IZQ5 122 aaKnown RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 RNASE11Q8TAA1 199 aaKnown RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 RRNAD1Q96FB5 475 aaKnown RBP14.8□□□□□ -0.04
TMEM54-204ENST00000474144 OR10C1Q96KK4 312 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 PDCD10Q9BUL8 212 aa14.8□□□□□ -0.04
TMEM54-204ENST00000474144 LYSTQ99698 3801 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 IGHV3OR16-13A0A075B7E8 117 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 IGHV3-74A0A0B4J1X5 117 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 GSTZ1O43708 216 aaPredicted RBP14.79□□□□□ -0.04
TMEM54-204ENST00000474144 B3GALNT1O75752 331 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 TNFSF8P32971 234 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 HOXA1P49639 335 aaPredicted RBP14.79□□□□□ -0.04
TMEM54-204ENST00000474144 SURF2Q15527 256 aaPredicted RBP14.79□□□□□ -0.04
TMEM54-204ENST00000474144 MLANAQ16655 118 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 ODF3L2Q3SX64 289 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 RHPN1-AS1Q9BWJ2 59 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 PRR13Q9NZ81 148 aa14.79□□□□□ -0.04
TMEM54-204ENST00000474144 MRPL36Q9P0J6 103 aaKnown RBP14.79□□□□□ -0.04
TMEM54-204ENST00000474144 CRYM-AS1A6NIL9 109 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 NOL3O60936 208 aaKnown RBP14.78□□□□□ -0.04
TMEM54-204ENST00000474144 TMEM116Q8NCL8 245 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 DUSP18Q8NEJ0 188 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 GPR146Q96CH1 333 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 SOSTQ9BQB4 213 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 RABL2AQ9UBK7 228 aaPredicted RBP14.78□□□□□ -0.04
TMEM54-204ENST00000474144 RABL2BQ9UNT1 228 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 HYDINQ4G0P3 5121 aa14.78□□□□□ -0.04
TMEM54-204ENST00000474144 TRAV14DV4A0A0A6YYC5 116 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 TMEM268Q5VZI3 342 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 TOMM20LQ6UXN7 152 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 MCFD2Q8NI22 146 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 RBPMSQ93062 196 aaKnown RBP14.77□□□□□ -0.05
TMEM54-204ENST00000474144 TMEM230Q96A57 120 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 PRRT1Q99946 306 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 OVOL2Q9BRP0 275 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 FNDC4Q9H6D8 234 aaPredicted RBP14.77□□□□□ -0.05
TMEM54-204ENST00000474144 ENY2Q9NPA8 101 aa14.77□□□□□ -0.05
TMEM54-204ENST00000474144 RSL24D1Q9UHA3 163 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms