RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 RELQ04864 619 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-222ENST00000473373 DEFB114Q30KQ6 69 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 ANKRD55Q3KP44 614 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 SPANXN2Q5MJ10 180 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 TMEM268Q5VZI3 342 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 RBPMSQ93062 196 aaKnown RBP8.73□□□□□ -1.01
CPNE1-222ENST00000473373 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 WDR89Q96FK6 387 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-222ENST00000473373 RCHY1Q96PM5 261 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 TMEM222Q9H0R3 208 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 DMRT1Q9Y5R6 373 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 TMEM213A2RRL7 107 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 A8MWP6 167 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 CORTO00230 105 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 NDUFA4O00483 81 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 ZNF207O43670 478 aaKnown RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 NXPH3O95157 252 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 MT-CO2P00403 227 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 OPRK1P41145 380 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 MFAP2P55001 183 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 FAM219AQ8IW50 185 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 DUSP18Q8NEJ0 188 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 RTBDNQ9BSG5 229 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 C5orf66Q9H5L9 145 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 HEYLQ9NQ87 328 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
CPNE1-222ENST00000473373 GPR132Q9UNW8 380 aa8.72□□□□□ -1.01
CPNE1-222ENST00000473373 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 OR11H12B2RN74 326 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 K7EIM0 57 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 CD7P09564 240 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 NPBWR1P48145 328 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 ELLP55199 621 aaPredicted RBP8.71□□□□□ -1.02
CPNE1-222ENST00000473373 KLK9Q2XQG4 91 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 TRIQKQ629K1 86 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM61Q8N0U2 210 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 Q8N1Y9 231 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM190Q8WZ59 177 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 SRD5A3Q9H8P0 318 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 CACNG5Q9UF02 275 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 MLXQ9UH92 298 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 KLK9Q9UKQ9 250 aa8.71□□□□□ -1.02
CPNE1-222ENST00000473373 A0A0B4J293 547 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 CDS2O95674 445 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 VAMP1P23763 118 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 BMI1P35226 326 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 SPCS3P61009 180 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 ADAMTSL5Q6ZMM2 481 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 SELENOHQ8IZQ5 122 aaKnown RBP8.7□□□□□ -1.02
CPNE1-222ENST00000473373 DEFB125Q8N687 156 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF114Q8NC26 417 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 GLYATL2Q8WU03 294 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 TXN2Q99757 166 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 GINS3Q9BRX5 216 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 CHRDL1Q9BU40 450 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF436Q9C0F3 470 aaPredicted RBP8.7□□□□□ -1.02
CPNE1-222ENST00000473373 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
CPNE1-222ENST00000473373 HIPK2Q9H2X6 1198 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 RYR2Q92736 4967 aa8.7□□□□□ -1.02
CPNE1-222ENST00000473373 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
CPNE1-222ENST00000473373 IGKV3-7A0A075B6H7 116 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 TRAV25A0A0B4J276 109 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 PIGBOS1A0A0B4J2F0 54 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 A0A0G2JRQ6 117 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 RPS10-NUDT3A0A1W2PQS6 291 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 SULT1A3P0DMM9 295 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 SULT1A4P0DMN0 295 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 SRPXP78539 464 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 LGI3Q8N145 548 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 OR1S1Q8NH92 325 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 WFDC10AQ9H1F0 79 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 PRR13Q9NZ81 148 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 CACFD1Q9UGQ2 172 aa8.69□□□□□ -1.02
CPNE1-222ENST00000473373 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 A8MZ25 164 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 I3L2K1 104 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 HTR2BP41595 481 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
CPNE1-222ENST00000473373 HAGHQ16775 308 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM116Q8NCL8 245 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 LHFPL5Q8TAF8 219 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 TMEM230Q96A57 120 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 GPR146Q96CH1 333 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 NARS2Q96I59 477 aaKnown RBP8.68□□□□□ -1.02
CPNE1-222ENST00000473373 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 UBQLN2Q9UHD9 624 aa8.68□□□□□ -1.02
CPNE1-222ENST00000473373 PAIP2BQ9ULR5 123 aaKnown RBP8.68□□□□□ -1.02
CPNE1-222ENST00000473373 TRAV14DV4A0A0A6YYC5 116 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 LINC00854A0A1B0GVQ3 168 aa8.67□□□□□ -1.02
CPNE1-222ENST00000473373 OR4C46A6NHA9 309 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms