RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-226ENST00000473066 NXF2Q9GZY0 626 aaKnown RBP11.78□□□□□ -0.52
MRPL55-226ENST00000473066 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
MRPL55-226ENST00000473066 DAZ1Q9NQZ3 744 aaKnown RBP11.78□□□□□ -0.52
MRPL55-226ENST00000473066 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
MRPL55-226ENST00000473066 CORTO00230 105 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 GNG7O60262 68 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 OR52B4Q8NGK2 314 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 RBPMSQ93062 196 aaKnown RBP11.77□□□□□ -0.53
MRPL55-226ENST00000473066 C5orf66Q9H5L9 145 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 MLXQ9UH92 298 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 GPR132Q9UNW8 380 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
MRPL55-226ENST00000473066 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 CRYM-AS1A6NIL9 109 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 MT-CO2P00403 227 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 P0C879 139 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 TXN2Q99757 166 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 SPATA25Q9BR10 227 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
MRPL55-226ENST00000473066 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 SELENOKQ9Y6D0 94 aa11.76□□□□□ -0.53
MRPL55-226ENST00000473066 A0A0B4J293 547 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 I3L2K1 104 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 SCGB2A1O75556 95 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
MRPL55-226ENST00000473066 CDS2O95674 445 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 CD7P09564 240 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 ANXA3P12429 323 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 TOMM5Q8N4H5 51 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 GLYATL2Q8WU03 294 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
MRPL55-226ENST00000473066 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-226ENST00000473066 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 INS-IGF2F8WCM5 200 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 YIF1AO95070 293 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 C8orf88P0DMB2 117 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 FCGR2BP31994 310 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-226ENST00000473066 ETV6P41212 452 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 NPBWR1P48145 328 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 SPCS3P61009 180 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 SOSTQ9BQB4 213 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 CACNG5Q9UF02 275 aa11.74□□□□□ -0.53
MRPL55-226ENST00000473066 IGHV3OR16-8A0A075B7F1 116 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-226ENST00000473066 ZNF701M0R085 212 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-226ENST00000473066 IGHV3-48P01763 117 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 AKR1C4P17516 323 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 BMI1P35226 326 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 ADMP35318 185 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 INPP1P49441 399 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 SRPXP78539 464 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 HAGHQ16775 308 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 SPANXN2Q5MJ10 180 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 SELENOHQ8IZQ5 122 aaKnown RBP11.73□□□□□ -0.53
MRPL55-226ENST00000473066 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 SPAG8Q99932 426 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-226ENST00000473066 GINS3Q9BRX5 216 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 HEYLQ9NQ87 328 aaPredicted RBP11.73□□□□□ -0.53
MRPL55-226ENST00000473066 CACFD1Q9UGQ2 172 aa11.73□□□□□ -0.53
MRPL55-226ENST00000473066 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 CEBPZOSA8MTT3 80 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 K7EMT4 169 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
MRPL55-226ENST00000473066 CTSGP08311 255 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 RNASE2P10153 161 aaKnown RBP11.72□□□□□ -0.53
MRPL55-226ENST00000473066 OPRK1P41145 380 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 TRIM63Q969Q1 353 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 GALNT14Q96FL9 552 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 RBM38Q9H0Z9 239 aaKnown RBP11.72□□□□□ -0.53
MRPL55-226ENST00000473066 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 V9GYH0 126 aa11.72□□□□□ -0.53
MRPL55-226ENST00000473066 RPS10-NUDT3A0A1W2PQS6 291 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 C3orf84H3BNL1 204 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 SULT1A3P0DMM9 295 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 SULT1A4P0DMN0 295 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 HTR2BP41595 481 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-226ENST00000473066 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 DEDD2Q8WXF8 326 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 TMEM230Q96A57 120 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 GPR146Q96CH1 333 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 TMEM56-RWDD3S4R434 201 aa11.71□□□□□ -0.53
MRPL55-226ENST00000473066 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 TMEM187Q14656 261 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 ZNF600Q6ZNG1 722 aa11.7□□□□□ -0.54
MRPL55-226ENST00000473066 Q6ZRM9 215 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms