RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C11orf45Q8TAV5 145 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 PHLDA1Q8WV24 401 aaPredicted RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 LSM10Q969L4 123 aaKnown RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 NARS2Q96I59 477 aaKnown RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 TMEM56Q96MV1 263 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 HDHD3Q9BSH5 251 aaPredicted RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 ZNF436Q9C0F3 470 aaPredicted RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 HRH4Q9H3N8 390 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 HRASLSQ9HDD0 168 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 FKBP14Q9NWM8 211 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 FKBP11Q9NYL4 201 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 MLXQ9UH92 298 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 DAPK2Q9UIK4 370 aa2.59□□□□□ -1.99
XRN1-209ENST00000472625 RBMX2Q9Y388 322 aaKnown RBP2.59□□□□□ -1.99
XRN1-209ENST00000472625 DNAH11Q96DT5 4516 aa2.58□□□□□ -2
XRN1-209ENST00000472625 KIAA1109Q2LD37 5005 aa2.58□□□□□ -2
XRN1-209ENST00000472625 A0A075B6Q4 140 aa2.58□□□□□ -2
XRN1-209ENST00000472625 A0A0A6YYD4 124 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TRAV2A0A0B4J234 112 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TEX48A0A1B0GUV7 120 aa2.58□□□□□ -2
XRN1-209ENST00000472625 CBY3A6NI87 242 aa2.58□□□□□ -2
XRN1-209ENST00000472625 IFITM5A6NNB3 132 aa2.58□□□□□ -2
XRN1-209ENST00000472625 SRRM4A7MD48 611 aaKnown RBP2.58□□□□□ -2
XRN1-209ENST00000472625 CORTO00230 105 aa2.58□□□□□ -2
XRN1-209ENST00000472625 PRH1P02810 166 aa2.58□□□□□ -2
XRN1-209ENST00000472625 SPP1P10451 314 aa2.58□□□□□ -2
XRN1-209ENST00000472625 MIFP14174 115 aa2.58□□□□□ -2
XRN1-209ENST00000472625 GNB3P16520 340 aa2.58□□□□□ -2
XRN1-209ENST00000472625 RAB3BP20337 219 aa2.58□□□□□ -2
XRN1-209ENST00000472625 CBX5P45973 191 aa2.58□□□□□ -2
XRN1-209ENST00000472625 HSPA13P48723 471 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TMEM50BP56557 158 aa2.58□□□□□ -2
XRN1-209ENST00000472625 HERV-K104P61576 105 aa2.58□□□□□ -2
XRN1-209ENST00000472625 NUTF2P61970 127 aaKnown RBP2.58□□□□□ -2
XRN1-209ENST00000472625 DEFA5Q01523 94 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TMEM187Q14656 261 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TBCEQ15813 527 aaPredicted RBP2.58□□□□□ -2
XRN1-209ENST00000472625 POU2AF1Q16633 256 aa2.58□□□□□ -2
XRN1-209ENST00000472625 C2orf76Q3KRA6 126 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TIMM50Q3ZCQ8 353 aa2.58□□□□□ -2
XRN1-209ENST00000472625 HACD4Q5VWC8 232 aa2.58□□□□□ -2
XRN1-209ENST00000472625 PRSS48Q7RTY5 328 aa2.58□□□□□ -2
XRN1-209ENST00000472625 SPAG16Q8N0X2 631 aa2.58□□□□□ -2
XRN1-209ENST00000472625 ZBTB8BQ8NAP8 495 aaPredicted RBP2.58□□□□□ -2
XRN1-209ENST00000472625 DMBX1Q8NFW5 382 aa2.58□□□□□ -2
XRN1-209ENST00000472625 OR1L8Q8NGR8 309 aa2.58□□□□□ -2
XRN1-209ENST00000472625 ZNF502Q8TBZ5 544 aa2.58□□□□□ -2
XRN1-209ENST00000472625 CACNG8Q8WXS5 425 aa2.58□□□□□ -2
XRN1-209ENST00000472625 GRAMD2BQ96HH9 432 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TXN2Q99757 166 aa2.58□□□□□ -2
XRN1-209ENST00000472625 RARRES2Q99969 163 aa2.58□□□□□ -2
XRN1-209ENST00000472625 CSTL1Q9H114 145 aa2.58□□□□□ -2
XRN1-209ENST00000472625 WFDC10AQ9H1F0 79 aa2.58□□□□□ -2
XRN1-209ENST00000472625 NDUFB11Q9NX14 153 aa2.58□□□□□ -2
XRN1-209ENST00000472625 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TAS2R8Q9NYW2 309 aa2.58□□□□□ -2
XRN1-209ENST00000472625 MDFICQ9P1T7 246 aa2.58□□□□□ -2
XRN1-209ENST00000472625 ANXA10Q9UJ72 324 aa2.58□□□□□ -2
XRN1-209ENST00000472625 PRNDQ9UKY0 176 aa2.58□□□□□ -2
XRN1-209ENST00000472625 SPATA2Q9UM82 520 aa2.58□□□□□ -2
XRN1-209ENST00000472625 LSM2Q9Y333 95 aaKnown RBP2.58□□□□□ -2
XRN1-209ENST00000472625 AK6Q9Y3D8 172 aaKnown RBP2.58□□□□□ -2
XRN1-209ENST00000472625 ETV7Q9Y603 341 aa2.58□□□□□ -2
XRN1-209ENST00000472625 TRAV14DV4A0A0A6YYC5 116 aa2.57□□□□□ -2
XRN1-209ENST00000472625 TRAV10A0A0B4J240 114 aa2.57□□□□□ -2
XRN1-209ENST00000472625 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
XRN1-209ENST00000472625 A0A1B0GUV1 79 aa2.57□□□□□ -2
XRN1-209ENST00000472625 A0A1W2PS18 150 aa2.57□□□□□ -2
XRN1-209ENST00000472625 OR2T8A6NH00 312 aa2.57□□□□□ -2
XRN1-209ENST00000472625 C15orf61A6NNL5 157 aa2.57□□□□□ -2
XRN1-209ENST00000472625 PTGES3LE9PB15 166 aa2.57□□□□□ -2
XRN1-209ENST00000472625 SNAPC5O75971 98 aa2.57□□□□□ -2
XRN1-209ENST00000472625 ATG12O94817 140 aa2.57□□□□□ -2
XRN1-209ENST00000472625 YIF1AO95070 293 aa2.57□□□□□ -2
XRN1-209ENST00000472625 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
XRN1-209ENST00000472625 PPYP01298 95 aa2.57□□□□□ -2
XRN1-209ENST00000472625 HLA-AP01891 365 aaKnown RBP2.57□□□□□ -2
XRN1-209ENST00000472625 AMBPP02760 352 aa2.57□□□□□ -2
XRN1-209ENST00000472625 SERPINE2P07093 398 aa2.57□□□□□ -2
XRN1-209ENST00000472625 TRAPPC2P0DI81 140 aa2.57□□□□□ -2
XRN1-209ENST00000472625 TRAPPC2BP0DI82 140 aa2.57□□□□□ -2
XRN1-209ENST00000472625 P0DMU3 169 aa2.57□□□□□ -2
XRN1-209ENST00000472625 FAM231AP0DMU4 169 aa2.57□□□□□ -2
XRN1-209ENST00000472625 FAM231CP0DMU5 169 aa2.57□□□□□ -2
XRN1-209ENST00000472625 AREGP15514 252 aa2.57□□□□□ -2
XRN1-209ENST00000472625 NFYAP23511 347 aaPredicted RBP2.57□□□□□ -2
XRN1-209ENST00000472625 FCGR2BP31994 310 aaPredicted RBP2.57□□□□□ -2
XRN1-209ENST00000472625 NUP62P37198 522 aaPredicted RBP2.57□□□□□ -2
XRN1-209ENST00000472625 NPBWR1P48145 328 aa2.57□□□□□ -2
XRN1-209ENST00000472625 CLDN12P56749 244 aa2.57□□□□□ -2
XRN1-209ENST00000472625 TAS2R46P59540 309 aa2.57□□□□□ -2
XRN1-209ENST00000472625 OR2B8PP59922 312 aa2.57□□□□□ -2
XRN1-209ENST00000472625 RPS25P62851 125 aaKnown RBP2.57□□□□□ -2
XRN1-209ENST00000472625 PLA2G7Q13093 441 aa2.57□□□□□ -2
XRN1-209ENST00000472625 INSL4Q14641 139 aa2.57□□□□□ -2
XRN1-209ENST00000472625 Q56UQ5 140 aa2.57□□□□□ -2
XRN1-209ENST00000472625 OR2B11Q5JQS5 317 aa2.57□□□□□ -2
XRN1-209ENST00000472625 C10orf55Q5SWW7 151 aa2.57□□□□□ -2
XRN1-209ENST00000472625 HES5Q5TA89 166 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms