RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
COMMD1-207ENST00000471704 MISP3Q96FF7 219 aa14.07□□□□□ -0.16
COMMD1-207ENST00000471704 SOSTQ9BQB4 213 aa14.07□□□□□ -0.16
COMMD1-207ENST00000471704 COPZ2Q9P299 210 aa14.07□□□□□ -0.16
COMMD1-207ENST00000471704 ST8SIA3O43173 380 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 IGHV3-48P01763 117 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 AKR1C2P52895 323 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 MEF2DQ14814 521 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 Q56UQ5 140 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 Q6ZRM9 215 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 CCDC71LQ8N9Z2 235 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 FAM110AQ9BQ89 295 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 C6orf62Q9GZU0 229 aaPredicted RBP14.06□□□□□ -0.16
COMMD1-207ENST00000471704 NXF2Q9GZY0 626 aaKnown RBP14.06□□□□□ -0.16
COMMD1-207ENST00000471704 C5orf66Q9H5L9 145 aa14.06□□□□□ -0.16
COMMD1-207ENST00000471704 ANKRD20A5PA0PJZ0 165 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 ZNF207O43670 478 aaKnown RBP14.05□□□□□ -0.16
COMMD1-207ENST00000471704 GSTZ1O43708 216 aaPredicted RBP14.05□□□□□ -0.16
COMMD1-207ENST00000471704 MT-CO2P00403 227 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 OR5AC1P0C628 307 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 FCGR2BP31994 310 aaPredicted RBP14.05□□□□□ -0.16
COMMD1-207ENST00000471704 TRIM16LQ309B1 348 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 PVRIGQ6DKI7 326 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 GLYATL2Q8WU03 294 aa14.05□□□□□ -0.16
COMMD1-207ENST00000471704 DAZ1Q9NQZ3 744 aaKnown RBP14.05□□□□□ -0.16
COMMD1-207ENST00000471704 PLECQ15149 4684 aaKnown RBP14.05□□□□□ -0.16
COMMD1-207ENST00000471704 TRAV25A0A0B4J276 109 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 AKAIN1P0CW23 69 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 TNFSF8P32971 234 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 OR52B4Q8NGK2 314 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 NAA60Q9H7X0 242 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 GPR132Q9UNW8 380 aa14.04□□□□□ -0.16
COMMD1-207ENST00000471704 EPPK1P58107 5090 aaKnown RBP14.03□□□□□ -0.16
COMMD1-207ENST00000471704 DISC1C4P0D8 188 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 CDS2O95674 445 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 ERHP84090 104 aaKnown RBP14.03□□□□□ -0.16
COMMD1-207ENST00000471704 SLC16A13Q7RTY0 426 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 OR51S1Q8NGJ8 323 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 IL17DQ8TAD2 202 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 PINX1Q96BK5 328 aaKnown RBP14.03□□□□□ -0.16
COMMD1-207ENST00000471704 C20orf24Q9BUV8 137 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 TMEM222Q9H0R3 208 aa14.03□□□□□ -0.16
COMMD1-207ENST00000471704 TEX13DA0A0J9YY54 714 aaPredicted RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 CRYM-AS1A6NIL9 109 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 K7EMT4 169 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 RNASE2P10153 161 aaKnown RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 ETV6P41212 452 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 MFAP4P55083 255 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 SURF2Q15527 256 aaPredicted RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 AARDQ4LEZ3 155 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 RBPMS2Q6ZRY4 209 aaKnown RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 SELENOHQ8IZQ5 122 aaKnown RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 SLC35G3Q8N808 338 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 TMEM230Q96A57 120 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 TXN2Q99757 166 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 RABL2AQ9UBK7 228 aaPredicted RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 RABL2BQ9UNT1 228 aa14.02□□□□□ -0.17
COMMD1-207ENST00000471704 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.17
COMMD1-207ENST00000471704 C15orf62A8K5M9 175 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 TSPAN4O14817 238 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 B3GALNT1O75752 331 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 IFNA17P01571 189 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 MCFD2Q8NI22 146 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 OR10C1Q96KK4 312 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 SPAG8Q99932 426 aaPredicted RBP14.01□□□□□ -0.17
COMMD1-207ENST00000471704 MRPL36Q9P0J6 103 aaKnown RBP14.01□□□□□ -0.17
COMMD1-207ENST00000471704 HYDINQ4G0P3 5121 aa14.01□□□□□ -0.17
COMMD1-207ENST00000471704 NUPL2O15504 423 aaKnown RBP14□□□□□ -0.17
COMMD1-207ENST00000471704 NOL3O60936 208 aaKnown RBP14□□□□□ -0.17
COMMD1-207ENST00000471704 ATG12O94817 140 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 BSXQ3C1V8 233 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 ANKRD55Q3KP44 614 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 RRNAD1Q96FB5 475 aaKnown RBP14□□□□□ -0.17
COMMD1-207ENST00000471704 PRRT1Q99946 306 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 FNDC4Q9H6D8 234 aaPredicted RBP14□□□□□ -0.17
COMMD1-207ENST00000471704 PRR13Q9NZ81 148 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 RSL24D1Q9UHA3 163 aaKnown RBP14□□□□□ -0.17
COMMD1-207ENST00000471704 UBQLN2Q9UHD9 624 aa14□□□□□ -0.17
COMMD1-207ENST00000471704 FABP12A6NFH5 140 aa13.99□□□□□ -0.17
COMMD1-207ENST00000471704 HOXA1P49639 335 aaPredicted RBP13.99□□□□□ -0.17
COMMD1-207ENST00000471704 RELQ04864 619 aaPredicted RBP13.99□□□□□ -0.17
COMMD1-207ENST00000471704 ODF3L2Q3SX64 289 aa13.99□□□□□ -0.17
COMMD1-207ENST00000471704 RBPMSQ93062 196 aaKnown RBP13.99□□□□□ -0.17
COMMD1-207ENST00000471704 GPR146Q96CH1 333 aa13.99□□□□□ -0.17
COMMD1-207ENST00000471704 RNF2Q99496 336 aa13.99□□□□□ -0.17
COMMD1-207ENST00000471704 RBM38Q9H0Z9 239 aaKnown RBP13.99□□□□□ -0.17
COMMD1-207ENST00000471704 SMPXQ9UHP9 88 aa13.99□□□□□ -0.17
COMMD1-207ENST00000471704 IGHV3-49A0A0A0MS15 119 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 IGHV7-4-1A0A0J9YVY3 117 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 CHEK1O14757 476 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 GNG7O60262 68 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 SNCAP37840 140 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 MLANAQ16655 118 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 TMEM268Q5VZI3 342 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 FAM219AQ8IW50 185 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 RNASE11Q8TAA1 199 aaKnown RBP13.98□□□□□ -0.17
COMMD1-207ENST00000471704 TRIM63Q969Q1 353 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 OVOL2Q9BRP0 275 aa13.98□□□□□ -0.17
COMMD1-207ENST00000471704 PDCD10Q9BUL8 212 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms