RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 P0C879 139 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 ZNF79Q15937 498 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 SP6Q3SY56 376 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 SPSB3Q6PJ21 355 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 ARRDC1Q8N5I2 433 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 ZNF486Q96H40 463 aaPredicted RBP11.43□□□□□ -0.58
COL1A1-203ENST00000471344 GGTLC1Q9BX51 225 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 C5orf66Q9H5L9 145 aa11.43□□□□□ -0.58
COL1A1-203ENST00000471344 EPPK1P58107 5090 aaKnown RBP11.43□□□□□ -0.58
COL1A1-203ENST00000471344 TRAV25A0A0B4J276 109 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 A0A0B4J293 547 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 MT-CO2P00403 227 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
COL1A1-203ENST00000471344 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 SCGB2B2Q4G0G5 96 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 OR13C8Q8NGS7 320 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 MARCH1Q8TCQ1 289 aa11.42□□□□□ -0.58
COL1A1-203ENST00000471344 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
COL1A1-203ENST00000471344 LOC102724200A0A096LPH7 203 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-203ENST00000471344 TSPAN4O14817 238 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 CTDSPLO15194 276 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 ST8SIA3O43173 380 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 CD74P04233 296 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 ANKRD55Q3KP44 614 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 CCDC190Q86UF4 302 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 TMEM229BQ8NBD8 167 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 SPAG8Q99932 426 aaPredicted RBP11.41□□□□□ -0.58
COL1A1-203ENST00000471344 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
COL1A1-203ENST00000471344 IGHV3OR16-13A0A075B7E8 117 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 IGHV3-74A0A0B4J1X5 117 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 C3orf85A0A1B0GTC6 90 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 FABP12A6NFH5 140 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 RAB3DO95716 219 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 CTSDP07339 412 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-203ENST00000471344 AKR1C2P52895 323 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 MFAP4P55083 255 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 MRPS10P82664 201 aaKnown RBP11.4□□□□□ -0.58
COL1A1-203ENST00000471344 SSBP1Q04837 148 aaKnown RBP11.4□□□□□ -0.58
COL1A1-203ENST00000471344 ZNF124Q15973 351 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 STEAP1BQ6NZ63 245 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 RNF2Q99496 336 aa11.4□□□□□ -0.58
COL1A1-203ENST00000471344 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 C15orf62A8K5M9 175 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 K7EMT4 169 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 NUPL2O15504 423 aaKnown RBP11.39□□□□□ -0.59
COL1A1-203ENST00000471344 GSTZ1O43708 216 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-203ENST00000471344 YIF1AO95070 293 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 TAS2R19P59542 299 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
COL1A1-203ENST00000471344 TRIM16LQ309B1 348 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 Q6ZRM9 215 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 TERB2Q8NHR7 220 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 LHFPL5Q8TAF8 219 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
COL1A1-203ENST00000471344 COPZ2Q9P299 210 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 SMPXQ9UHP9 88 aa11.39□□□□□ -0.59
COL1A1-203ENST00000471344 CHEK1O14757 476 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 UCP1P25874 307 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-203ENST00000471344 ETV6P41212 452 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 TFPI2P48307 235 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-203ENST00000471344 APRG1Q8IVJ8 170 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 SLC35G3Q8N808 338 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 ZFAND1Q8TCF1 268 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 OR10C1Q96KK4 312 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 RHPN1-AS1Q9BWJ2 59 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 RABL2AQ9UBK7 228 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-203ENST00000471344 RABL2BQ9UNT1 228 aa11.38□□□□□ -0.59
COL1A1-203ENST00000471344 ANKRD20A5PA0PJZ0 165 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 A6NHS1 94 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 GNG7O60262 68 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 B3GALNT1O75752 331 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 ATG12O94817 140 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 IFNA17P01571 189 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 APOHP02749 345 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 OR5AC1P0C628 307 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 RNASE2P10153 161 aaKnown RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 ERHP84090 104 aaKnown RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 DEFB135Q30KP9 77 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 TMEM116Q8NCL8 245 aa11.37□□□□□ -0.59
COL1A1-203ENST00000471344 SDHCQ99643 169 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-203ENST00000471344 IGHV3-66A0A0C4DH42 116 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 INS-IGF2F8WCM5 200 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 HOXA1P49639 335 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-203ENST00000471344 MEF2DQ14814 521 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 MLANAQ16655 118 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 PYDC2Q56P42 97 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 PVRIGQ6DKI7 326 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
COL1A1-203ENST00000471344 LILRB2Q8N423 598 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms