RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ZNF320A2RRD8 509 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 A6NJ64 397 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 H0Y9J4 135 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 LY6LH3BQJ8 138 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 M0R1X1 148 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SULT1C2O00338 296 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 NPFFO15130 113 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 ARPC1BO15143 372 aaKnown RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 NDUFA2O43678 99 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CHST1O43916 411 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 RAMP3O60896 148 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 RBBP9O75884 186 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 FSTL3O95633 263 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 PPYP01298 95 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 IGLV1-47P01700 117 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 IGHV1-69P01742 117 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CD74P04233 296 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 DTYMKP23919 212 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 PRTN3P24158 256 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 RCVRNP35243 200 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 MRPS15P82914 257 aaKnown RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 MEF2CQ06413 473 aaPredicted RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 EIF4EBP1Q13541 118 aaPredicted RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF846Q147U1 533 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 CDK10Q15131 360 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 KCNJ8Q15842 424 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 TRIQKQ629K1 86 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 NCR3LG1Q68D85 454 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SPNS3Q6ZMD2 512 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 IDO2Q6ZQW0 420 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 C19orf35Q6ZS72 473 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 KCTD9Q7L273 389 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 TMED4Q7Z7H5 227 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 LHFPL1Q86WI0 220 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 DRAM1Q8N682 238 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SIGLECL1Q8N7X8 197 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 TMEM229BQ8NBD8 167 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 OR5D13Q8NGL4 314 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 OR51H1Q8NH63 302 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 LHFPL5Q8TAF8 219 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 PIFOQ8TCI5 191 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 UPRTQ96BW1 309 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 GALMQ96C23 342 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SEC22CQ9BRL7 303 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 AGMATQ9BSE5 352 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 RTBDNQ9BSG5 229 aaPredicted RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SLC5A7Q9GZV3 580 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 RHOFQ9HBH0 211 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SPACA1Q9HBV2 294 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 KCNIP1Q9NZI2 227 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 FOXA2Q9Y261 457 aaPredicted RBP2.85□□□□□ -1.95
COL9A1-206ENST00000470652 SIGLEC9Q9Y336 463 aa2.85□□□□□ -1.95
COL9A1-206ENST00000470652 HIVEP2P31629 2446 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 TRAV3A0A0B4J244 114 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 IGHV3-35A0A0C4DH35 117 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 A0A0G2JRQ6 117 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 VGLL3A8MV65 326 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 BUB1B-PAK6H3BSN5 160 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 M0R1W7 72 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 LYRM1O43325 122 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 YPEL1O60688 119 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 CA11O75493 328 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 OPN1MWP04001 364 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 IGKV1-16P04430 117 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 GLAP06280 429 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 AKAIN1P0CW23 69 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 APELAP0DMC3 54 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 OPN1MW2P0DN77 364 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 OPN1MW3P0DN78 364 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 UCP1P25874 307 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 GNRHRP30968 328 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 KCNJ3P48549 501 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 TAS2R19P59542 299 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 SUPT4H1P63272 117 aaKnown RBP2.84□□□□□ -1.95
COL9A1-206ENST00000470652 PITPNAQ00169 270 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 DEFA5Q01523 94 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF45Q02386 682 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 PAX5Q02548 391 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF816Q0VGE8 651 aaPredicted RBP2.84□□□□□ -1.95
COL9A1-206ENST00000470652 PJVKQ0ZLH3 352 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 SLC9A3R2Q15599 337 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 HLA-DRB5Q30154 266 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 SPINK9Q5DT21 86 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 RNASE10Q5GAN6 216 aaKnown RBP2.84□□□□□ -1.95
COL9A1-206ENST00000470652 VAX1Q5SQQ9 334 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 C10orf55Q5SWW7 151 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 C6orf183Q5T699 404 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 TPTE2P1Q5T6R2 138 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 C16orf87Q6PH81 154 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 Q6ZS49 121 aa2.84□□□□□ -1.95
COL9A1-206ENST00000470652 SLC25A48Q6ZT89 311 aaKnown RBP2.84□□□□□ -1.95
COL9A1-206ENST00000470652 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms