RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 UFC1Q9Y3C8 167 aa12.32□□□□□ -0.44
GTF3C2-209ENST00000470115 NAP1L6A6NFF2 107 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 CTSDP07339 412 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 C8orf88P0DMB2 117 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 ELLP55199 621 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 SURF2Q15527 256 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 BTNL8Q6UX41 500 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 OR1P1Q8NH06 330 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 MARC2Q969Z3 335 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 BSCL2Q96G97 398 aaPredicted RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 CITED4Q96RK1 184 aa12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
GTF3C2-209ENST00000470115 TEX13DA0A0J9YY54 714 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 C3orf85A0A1B0GTC6 90 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 IGKV1-5P01602 117 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 ADMP35318 185 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 CCR6P51684 374 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 PRCDQ00LT1 54 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 SP6Q3SY56 376 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 Q56UQ5 140 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 SPSB3Q6PJ21 355 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 TMED4Q7Z7H5 227 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 TMEM190Q8WZ59 177 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 SRD5A3Q9H8P0 318 aa12.3□□□□□ -0.44
GTF3C2-209ENST00000470115 A0A0B4J293 547 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 RBMY1BA6NDE4 496 aaKnown RBP12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 RBMY1EA6NEQ0 496 aaKnown RBP12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 RBMY1DP0C7P1 496 aaKnown RBP12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 AKR1C4P17516 323 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 SPINK9Q5DT21 86 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 CASC10Q5T4H9 136 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 SLC16A13Q7RTY0 426 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 OR52B4Q8NGK2 314 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 MISP3Q96FF7 219 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 C5orf66Q9H5L9 145 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 GPR132Q9UNW8 380 aa12.29□□□□□ -0.44
GTF3C2-209ENST00000470115 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 TRAV25A0A0B4J276 109 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 I3L2K1 104 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 NDUFA4O00483 81 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 LYRM1O43325 122 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 CTSGP08311 255 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 P0C879 139 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 LYL1P12980 280 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 AKR1C2P52895 323 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 RBPMS2Q6ZRY4 209 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 SLC25A21Q9BQT8 299 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 RTBDNQ9BSG5 229 aaPredicted RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 C20orf24Q9BUV8 137 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 RETNQ9HD89 108 aa12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 DAZ1Q9NQZ3 744 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
GTF3C2-209ENST00000470115 ZNF207O43670 478 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 UPK1BO75841 260 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 ATG12O94817 140 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 IGHV3-48P01763 117 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 MFAP4P55083 255 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 ERHP84090 104 aaKnown RBP12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 TRIM16LQ309B1 348 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 ZNF114Q8NC26 417 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 HIPK2Q9H2X6 1198 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 NAA60Q9H7X0 242 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 EDA2RQ9HAV5 297 aa12.27□□□□□ -0.45
GTF3C2-209ENST00000470115 CSMD3Q7Z407 3707 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 PLA2G10O15496 165 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 ST8SIA3O43173 380 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 MT-CO2P00403 227 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 UCP1P25874 307 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 ANKRD55Q3KP44 614 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 MZT2BQ6NZ67 158 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 ZNF414Q96IQ9 312 aa12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
GTF3C2-209ENST00000470115 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 K7EMT4 169 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 IFNA17P01571 189 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 SNCAP37840 140 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 CENPSQ8N2Z9 138 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 SLC35G3Q8N808 338 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 RNASE11Q8TAA1 199 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 RRNAD1Q96FB5 475 aaKnown RBP12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 TXN2Q99757 166 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 TMEM222Q9H0R3 208 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 KCNIP3Q9Y2W7 256 aa12.25□□□□□ -0.45
GTF3C2-209ENST00000470115 FAM240BA0A1B0GVZ2 78 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 NUPL2O15504 423 aaKnown RBP12.24□□□□□ -0.45
GTF3C2-209ENST00000470115 B3GALNT1O75752 331 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms