RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 C18orf12Q96KH6 178 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 RALGAPA1Q6GYQ0 2036 aa13.18□□□□□ -0.3
BRAT1-204ENST00000469750 GRIFINA4D1Z8 144 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 EFNB1P98172 346 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 ASIPP42127 132 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 FOXF2Q12947 444 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 LY6DQ14210 128 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 ZNF418Q8TF45 676 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-204ENST00000469750 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 HEATR5BQ9P2D3 2071 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 MIR17HGQ75NE6 70 aa13.17□□□□□ -0.3
BRAT1-204ENST00000469750 CBLN1P23435 193 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 SCN5AQ14524 2016 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 SCO2A0A1W2PP80 73 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 NPFFO15130 113 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 IGHV1-46P01743 117 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 PRSS2P07478 247 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 NPFFR1Q9GZQ6 430 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 GEMIN7Q9H840 131 aaKnown RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 YAE1D1Q9NRH1 226 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 H7C1H1 209 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 H7C2G1 150 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 FMC1Q96HJ9 113 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 M0R381 172 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 SRP19P09132 144 aaKnown RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 CIRBPQ14011 172 aaKnown RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 COLCA1Q6ZS62 124 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 PAQR4Q8N4S7 273 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 TRAV14DV4A0A0A6YYC5 116 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 IL18BPO95998 194 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 TFF1P04155 84 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 TBR1Q16650 682 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 ITLN2Q8WWU7 325 aaPredicted RBP13.16□□□□□ -0.3
BRAT1-204ENST00000469750 HIST1H4GQ99525 98 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 IL36BQ9NZH7 164 aa13.16□□□□□ -0.3
BRAT1-204ENST00000469750 NCOR1O75376 2440 aa13.15□□□□□ -0.3
BRAT1-204ENST00000469750 ATP5G3P48201 142 aa13.15□□□□□ -0.3
BRAT1-204ENST00000469750 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-204ENST00000469750 DERL1Q9BUN8 251 aa13.15□□□□□ -0.3
BRAT1-204ENST00000469750 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
BRAT1-204ENST00000469750 C7orf71A4D174 169 aa13.15□□□□□ -0.3
BRAT1-204ENST00000469750 PRB3Q04118 309 aaPredicted RBP13.15□□□□□ -0.3
BRAT1-204ENST00000469750 SMIM13P0DJ93 91 aa13.15□□□□□ -0.31
BRAT1-204ENST00000469750 NABP1Q96AH0 204 aa13.15□□□□□ -0.31
BRAT1-204ENST00000469750 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 BTCP35070 178 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 IGKV3OR2-268A0A0C4DH90 116 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 FOXA3P55318 350 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-204ENST00000469750 CIARTQ8N365 385 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-204ENST00000469750 COPS9Q8WXC6 57 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 Q9H3A6 140 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 SLC17A3O00476 420 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 PPP1R17O96001 155 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 VCX2Q9H322 139 aa13.14□□□□□ -0.31
BRAT1-204ENST00000469750 A0A1B0GUT8 65 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 ZNF324BQ6AW86 544 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-204ENST00000469750 BIVMQ86UB2 503 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 PEMTQ9UBM1 199 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 RAMP3O60896 148 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 PLAURQ03405 335 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 PVRIGQ6DKI7 326 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 NUDT11Q96G61 164 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 PRELID3AQ96N28 172 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 ARHGEF17Q96PE2 2063 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-204ENST00000469750 A0A0A6YYD4 124 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 DUTP33316 252 aaKnown RBP13.13□□□□□ -0.31
BRAT1-204ENST00000469750 PRSS22Q9GZN4 317 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
BRAT1-204ENST00000469750 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 ACACAQ13085 2346 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 UBE2CO00762 179 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 TNFRSF14Q92956 283 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
BRAT1-204ENST00000469750 IGKV1-12A0A0C4DH73 117 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 SRRM5B3KS81 715 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 IGKV1D-12P01611 117 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 MPZP25189 248 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 RNF126Q9BV68 326 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
BRAT1-204ENST00000469750 MYOD1P15172 320 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 Q0VFX4 171 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 GFI1Q99684 422 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 C10orf126Q8N4M7 172 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 CLPSP04118 112 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 CD24P25063 80 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 GAS1P54826 345 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 Q6AWC8 147 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 OTORQ9NRC9 128 aa13.12□□□□□ -0.31
BRAT1-204ENST00000469750 DPRXA6NFQ7 191 aa13.11□□□□□ -0.31
BRAT1-204ENST00000469750 ATRAIDQ6UW56 229 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms