RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 S100A10P60903 97 aa13.26□□□□□ -0.29
VARS2-204ENST00000467717 RPP30P78346 268 aaKnown RBP13.26□□□□□ -0.29
VARS2-204ENST00000467717 C15orf32Q32M92 178 aa13.26□□□□□ -0.29
VARS2-204ENST00000467717 LSM5Q9Y4Y9 91 aaKnown RBP13.26□□□□□ -0.29
VARS2-204ENST00000467717 TRRAPQ9Y4A5 3859 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 CORTO00230 105 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 NDUFB8O95169 186 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 DEFA5Q01523 94 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 RAB32Q13637 225 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 TMEM170AQ8WVE7 144 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 MISP3Q96FF7 219 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 SMIM8Q96KF7 97 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 ZNF436Q9C0F3 470 aaPredicted RBP13.25□□□□□ -0.29
VARS2-204ENST00000467717 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
VARS2-204ENST00000467717 A0A1W2PRX2 142 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 ADARB2-AS1A8MUL3 147 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 NUDT19A8MXV4 375 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 TMEM50AO95807 157 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 IGHV3-11P01762 117 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 PVALBP20472 110 aaPredicted RBP13.24□□□□□ -0.29
VARS2-204ENST00000467717 TAS2R30P59541 319 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 KLHL30-AS1Q8NEE0 82 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
VARS2-204ENST00000467717 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 PPP1R1CQ8WVI7 109 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 ASB13Q8WXK3 278 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 CXorf58Q96LI9 332 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 PSENENQ9NZ42 101 aa13.24□□□□□ -0.29
VARS2-204ENST00000467717 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 H3BP45 60 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 K7EIM0 57 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 L7N2F9 121 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 MT-CO2P00403 227 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 RLN2P04090 185 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 IFNA4P05014 189 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 PAX9P55771 341 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 RAB11AP62491 216 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 VAMP2P63027 116 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 EXOSC2Q13868 293 aaKnown RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 LRRC37A5PQ49AS3 106 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 SPANXN5Q5MJ07 72 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 C18orf65Q6ZTR6 163 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 EEF1AKMT3Q96AZ1 226 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 PINX1Q96BK5 328 aaKnown RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 WDR89Q96FK6 387 aaPredicted RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
VARS2-204ENST00000467717 STRAPQ9Y3F4 350 aaKnown RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 TET2Q6N021 2002 aaPredicted RBP13.23□□□□□ -0.29
VARS2-204ENST00000467717 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 I3L2K1 104 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 TSC22D2O75157 780 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 GIPP09681 153 aaPredicted RBP13.22□□□□□ -0.29
VARS2-204ENST00000467717 OR8U8P0C7N1 319 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 RUNX1Q01196 453 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 ZNF343Q6P1L6 599 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 SCARB1Q8WTV0 552 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 C11orf1Q9H5F2 150 aa13.22□□□□□ -0.29
VARS2-204ENST00000467717 PAIP2BQ9ULR5 123 aaKnown RBP13.22□□□□□ -0.29
VARS2-204ENST00000467717 TRBV7-1A0A0A6YYK4 115 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 IGHV3-21A0A0B4J1V1 117 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 I3L521 148 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 DEDDO75618 318 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 MPC2O95563 127 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 PET100P0DJ07 73 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 OPRK1P41145 380 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 ETV3LQ6ZN32 361 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 C8orf86Q6ZUL3 223 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
VARS2-204ENST00000467717 RPS10-NUDT3A0A1W2PQS6 291 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 E5RGE8 158 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 CAV2P51636 162 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 RAP2BP61225 183 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 TMEM14EPQ6UXP3 125 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 ZNF502Q8TBZ5 544 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 OR4F4Q96R69 305 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 S4R3C0 116 aa13.2□□□□□ -0.3
VARS2-204ENST00000467717 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 H0YIZ8 118 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 M0QZ24 198 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 IGHV3-23P01764 117 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 FCGR2BP31994 310 aaPredicted RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 BCAP31P51572 246 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
VARS2-204ENST00000467717 FNDC4Q9H6D8 234 aaPredicted RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 RANGRFQ9HD47 186 aaPredicted RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 LYRM2Q9NU23 88 aaPredicted RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
VARS2-204ENST00000467717 ANKRD34BA5PLL1 514 aa13.18□□□□□ -0.3
VARS2-204ENST00000467717 HSPB1P04792 205 aaKnown RBP13.18□□□□□ -0.3
VARS2-204ENST00000467717 CLEC3BP05452 202 aa13.18□□□□□ -0.3
VARS2-204ENST00000467717 SLC25A4P12235 298 aa13.18□□□□□ -0.3
VARS2-204ENST00000467717 GPX4P36969 197 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms