RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 GABRA6Q16445 453 aa14.89□□□□□ -0.03
SNAPC3-205ENST00000467062 FGFRL1Q8N441 504 aa14.89□□□□□ -0.03
SNAPC3-205ENST00000467062 OR2D2Q9H210 308 aa14.89□□□□□ -0.03
SNAPC3-205ENST00000467062 C7orf71A4D174 169 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 MT-CO2P00403 227 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 SCGB2A2Q13296 93 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 MRPL54Q6P161 138 aaKnown RBP14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 Q6ZR03 302 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 FAM214BQ7L5A3 538 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 LINC00596Q86U02 117 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 C11orf52Q96A22 123 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 AP1S3Q96PC3 154 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 STAG3L2P0CL84 134 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 STAG3L3P0CL85 134 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 GATA2P23769 480 aaPredicted RBP14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 GCSAMLQ5JQS6 135 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 C9orf106Q8NAJ2 232 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 RFESDQ8TAC1 157 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
SNAPC3-205ENST00000467062 ZNF718Q3SXZ3 478 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 NEGR1Q7Z3B1 354 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 DRAM1Q8N682 238 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 OSTCQ9NRP0 149 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 C1RLQ9NZP8 487 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 TRBV6-6A0A0A6YYG2 114 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 HAND1O96004 215 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 PPIAL4GP0DN37 164 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 EDDM3BP56851 147 aa14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 ZNF331Q9NQX6 463 aaPredicted RBP14.87□□□□□ -0.03
SNAPC3-205ENST00000467062 IGHV3-43A0A0B4J1X8 118 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 DEFB108AA8MXU0 73 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 SMIM17P0DL12 118 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 IGHV3-43DP0DP04 118 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 KIR2DL2P43627 348 aaPredicted RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 SLC35B1P78383 322 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 LTC4SQ16873 150 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 CLCF1Q9UBD9 225 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 TP73-AS1Q9UF72 201 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 POLDIP2Q9Y2S7 368 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 KALRNO60229 2985 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 GOSR1O95249 250 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 USF1P22415 310 aaPredicted RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 ZNF816Q0VGE8 651 aaPredicted RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 WFDC12Q8WWY7 111 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 DCTN5Q9BTE1 182 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 WDR83OSQ9Y284 106 aa14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 YTHDF2Q9Y5A9 579 aaKnown RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 INTS1Q8N201 2190 aaKnown RBP14.86□□□□□ -0.03
SNAPC3-205ENST00000467062 FAM231BA6NCW3 169 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 GNG4P50150 75 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 SEC11AP67812 179 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 Q6ZT83 130 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 Q8N7P7 452 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 SAP30LQ9HAJ7 183 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 PIEZO2Q9H5I5 2752 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 CRXO43186 299 aaPredicted RBP14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 CGAP01215 116 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 IGHV3-13P01766 116 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 IGHV3-7P01780 117 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 RPL30P62888 115 aaKnown RBP14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 KLF5Q13887 457 aaPredicted RBP14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 ZNF146Q15072 292 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 RNASEKQ6P5S7 137 aaKnown RBP14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 C11orf53Q8IXP5 236 aa14.85□□□□□ -0.03
SNAPC3-205ENST00000467062 C12orf77C9JDV5 145 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 TCL1AP56279 114 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 SPINK9Q5DT21 86 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 C5orf30Q96GV9 206 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 ATP6V0BQ99437 205 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 LRRC30A6NM36 301 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 MPDU1O75352 247 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 G6PCP35575 357 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 RASL11AQ6T310 242 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 SPATA12Q7Z6I5 190 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 WDR31Q8NA23 367 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 FNDC4Q9H6D8 234 aaPredicted RBP14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 TNFRSF19Q9NS68 423 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 PSG11Q9UQ72 335 aa14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
SNAPC3-205ENST00000467062 IZUMO1RA6ND01 250 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 GPR183P32249 361 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 FAM162BQ5T6X4 162 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 TMEM191AQ9H0A3 160 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 NPVFQ9HCQ7 196 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 SCRT2Q9NQ03 307 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 ROS1P08922 2347 aa14.83□□□□□ -0.03
SNAPC3-205ENST00000467062 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 hDV102S1A0JD36 115 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 IQCF6A8MYZ5 107 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 K7EP34 96 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 TIMM8AO60220 97 aaPredicted RBP14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 ZG16O60844 167 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 FTH1P19P0C7X4 201 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 OPRK1P41145 380 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 SLAQ13239 276 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 DEFB109BQ30KR1 87 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 CFAP161Q6P656 301 aa14.83□□□□□ -0.04
SNAPC3-205ENST00000467062 SIGMAR1Q99720 223 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms