RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 REPIN1Q9BWE0 567 aaKnown RBP7.3□□□□□ -1.24
HPS4-209ENST00000466781 IL36BQ9NZH7 164 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 LINC00271P0C7V0 271 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 ZNF250P15622 560 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 SDHCQ99643 169 aaPredicted RBP7.3□□□□□ -1.24
HPS4-209ENST00000466781 ASCL2Q99929 193 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 CHCHD5Q9BSY4 110 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 ELF5Q9UKW6 265 aaPredicted RBP7.3□□□□□ -1.24
HPS4-209ENST00000466781 CHD5Q8TDI0 1954 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 DANCRP0C864 163 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 C21orf62-AS1Q17RA5 79 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 C17orf98A8MV24 154 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 TMEM14DPA8MWL7 114 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 CD28P10747 220 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 EGR4Q05215 589 aa7.3□□□□□ -1.24
HPS4-209ENST00000466781 MRPS18CQ9Y3D5 142 aaKnown RBP7.3□□□□□ -1.24
HPS4-209ENST00000466781 ANKRD36A6QL64 1941 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 SCO2A0A1W2PP80 73 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
HPS4-209ENST00000466781 RHOGP84095 191 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 PRB3Q04118 309 aaPredicted RBP7.29□□□□□ -1.24
HPS4-209ENST00000466781 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 CELA3BP08861 270 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 GNLYP22749 145 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 C1QTNF5Q9BXJ0 243 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 TMEM133Q9H2Q1 129 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 SLC25A15Q9Y619 301 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 E9PLN8 166 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 OR2K2Q8NGT1 345 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 CACNG8Q8WXS5 425 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 VKORC1Q9BQB6 163 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 ZP1P60852 638 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 DTX1Q86Y01 620 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 ORMDL3Q8N138 153 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 APCDD1LQ8NCL9 501 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 CTHRC1Q96CG8 243 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 IMMP1LQ96LU5 166 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 TICRRQ7Z2Z1 1910 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 SAA2-SAA4A0A096LPE2 208 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 TRAV12-3A0A0B4J271 114 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 VENTXO95231 258 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 APOMO95445 188 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 SAA2P0DJI9 122 aaPredicted RBP7.29□□□□□ -1.24
HPS4-209ENST00000466781 CCL3L1P16619 93 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 CBLN1P23435 193 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 FHITP49789 147 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 PSG7Q13046 419 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 PRSS33Q8NF86 280 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
HPS4-209ENST00000466781 PEF1Q9UBV8 284 aaKnown RBP7.29□□□□□ -1.24
HPS4-209ENST00000466781 TGFBR3LH3BV60 316 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 IGHV4-39P01824 125 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 CKS1BP61024 79 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 PAX2Q02962 417 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 ZNF600Q6ZNG1 722 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 TMEM86BQ8N661 226 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 LOC102723996A0A087X1L8 192 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
HPS4-209ENST00000466781 FABP5P3A8MUU1 101 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 EGR1P18146 543 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 SIGLEC15Q6ZMC9 328 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 MIR17HGQ75NE6 70 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 TM2D1Q9BX74 207 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 PAX8Q06710 450 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 SRSF7Q16629 238 aaKnown RBP eCLIP7.28□□□□□ -1.24
HPS4-209ENST00000466781 ZNF660Q6AZW8 331 aaPredicted RBP7.28□□□□□ -1.24
HPS4-209ENST00000466781 FAM169BQ8N8A8 192 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 SRD5A1P18405 259 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 CD300CQ08708 224 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 UPK2O00526 184 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 PSMG4Q5JS54 123 aa7.28□□□□□ -1.24
HPS4-209ENST00000466781 SPAG8Q99932 426 aaPredicted RBP7.28□□□□□ -1.24
HPS4-209ENST00000466781 IZUMO1RA6ND01 250 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 OVOL1O14753 267 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 GCM2O75603 506 aaPredicted RBP7.27□□□□□ -1.25
HPS4-209ENST00000466781 VMO1Q7Z5L0 202 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 SPAG17Q6Q759 2223 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 A0A0G2JK05 382 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 DPRXA6NFQ7 191 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 RAMP1O60894 148 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 RNF125Q96EQ8 232 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 TRAV41A0A0B4J266 112 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 C20orf204Q6ZNR8 217 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 SEPSECSQ9HD40 501 aaKnown RBP7.27□□□□□ -1.25
HPS4-209ENST00000466781 NPDC1Q9NQX5 325 aaPredicted RBP7.27□□□□□ -1.25
HPS4-209ENST00000466781 ZNF257Q9Y2Q1 563 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 TDRD6O60522 2096 aaKnown RBP7.27□□□□□ -1.25
HPS4-209ENST00000466781 MYOFQ9NZM1 2061 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 THADAQ6YHU6 1953 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 ANK1P16157 1881 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 IGLV3-12A0A075B6K2 115 aa7.27□□□□□ -1.25
HPS4-209ENST00000466781 A0A087WX48 190 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms